RNA–Protein interactions for RNA: ENST00000561554.5

RPL4-202, Transcript of ribosomal protein L4, humanhuman

TSL 4

Gene RPL4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-202ENST00000561554 SYDE2Q5VT97 1194 aa12.8□□□□□ -0.36
RPL4-202ENST00000561554 GDF6Q6KF10 455 aaPredicted RBP12.8□□□□□ -0.36
RPL4-202ENST00000561554 CCDC62Q6P9F0 684 aa12.8□□□□□ -0.36
RPL4-202ENST00000561554 RGS22Q8NE09 1264 aa12.8□□□□□ -0.36
RPL4-202ENST00000561554 CLEC4DQ8WXI8 215 aa12.8□□□□□ -0.36
RPL4-202ENST00000561554 FBXL18Q96ME1 805 aa12.8□□□□□ -0.36
RPL4-202ENST00000561554 UPF3BQ9BZI7 483 aaKnown RBP12.8□□□□□ -0.36
RPL4-202ENST00000561554 BCL11AQ9H165 835 aa12.8□□□□□ -0.36
RPL4-202ENST00000561554 GTF2IRD1Q9UHL9 959 aa12.8□□□□□ -0.36
RPL4-202ENST00000561554 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
RPL4-202ENST00000561554 MICAL3Q7RTP6 2002 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 C19orf67A6NJJ6 358 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 NCK2O43639 380 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 CASTP20810 708 aaKnown RBP12.79□□□□□ -0.36
RPL4-202ENST00000561554 HTRA4P83105 476 aaPredicted RBP12.79□□□□□ -0.36
RPL4-202ENST00000561554 CCDC96Q2M329 555 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 SLC30A10Q6XR72 485 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 FBXO22Q8NEZ5 403 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
RPL4-202ENST00000561554 DHX38Q92620 1227 aaKnown RBP12.79□□□□□ -0.36
RPL4-202ENST00000561554 PABPC5Q96DU9 382 aaKnown RBP12.79□□□□□ -0.36
RPL4-202ENST00000561554 UIMC1Q96RL1 719 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 CRBNQ96SW2 442 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 KATNAL1Q9BW62 490 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 MTUS1Q9ULD2 1270 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 EMSYQ7Z589 1322 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 COL4A6Q14031 1691 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 TRIOO75962 3097 aa12.79□□□□□ -0.36
RPL4-202ENST00000561554 GH1P01241 217 aa12.78□□□□□ -0.36
RPL4-202ENST00000561554 MMP3P08254 477 aa12.78□□□□□ -0.36
RPL4-202ENST00000561554 FGRP09769 529 aa12.78□□□□□ -0.36
RPL4-202ENST00000561554 CALML3P27482 149 aa12.78□□□□□ -0.36
RPL4-202ENST00000561554 ZP2Q05996 745 aa12.78□□□□□ -0.36
RPL4-202ENST00000561554 PTK7Q13308 1070 aa12.78□□□□□ -0.36
RPL4-202ENST00000561554 TMCO2Q7Z6W1 182 aaPredicted RBP12.78□□□□□ -0.36
RPL4-202ENST00000561554 KAT2BQ92831 832 aa12.78□□□□□ -0.36
RPL4-202ENST00000561554 COPS5Q92905 334 aa12.78□□□□□ -0.36
RPL4-202ENST00000561554 EMID1Q96A84 441 aaPredicted RBP12.78□□□□□ -0.36
RPL4-202ENST00000561554 MFSD14AQ96MC6 490 aa12.78□□□□□ -0.36
RPL4-202ENST00000561554 ANAPC4Q9UJX5 808 aa12.78□□□□□ -0.36
RPL4-202ENST00000561554 ORC4O43929 436 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 LGR5O75473 907 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 ARIH2O95376 493 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 AMHP03971 560 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 ARHGAP1Q07960 439 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 DGKDQ16760 1214 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 TTBK2Q6IQ55 1244 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 TRAF7Q6Q0C0 670 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 ADHFE1Q8IWW8 467 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 BANK1Q8NDB2 785 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 AFG1LQ8WV93 481 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 C17orf80Q9BSJ5 609 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 SSUH2Q9Y2M2 353 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 KIAA1217Q5T5P2 1943 aa12.77□□□□□ -0.37
RPL4-202ENST00000561554 H3BNC9 293 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 HAS3O00219 553 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 NMT2O60551 498 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 F2P00734 622 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 TOP1P11387 765 aaKnown RBP12.76□□□□□ -0.37
RPL4-202ENST00000561554 SLC16A2P36021 539 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 PKN1Q16512 942 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 TRIM71Q2Q1W2 868 aaKnown RBP12.76□□□□□ -0.37
RPL4-202ENST00000561554 EPC2Q52LR7 807 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 ZMYM1Q5SVZ6 1142 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 RASGRP2Q7LDG7 609 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 C7orf31Q8N865 590 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 PPP1R13LQ8WUF5 828 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 IWS1Q96ST2 819 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 POP1Q99575 1024 aaKnown RBP12.76□□□□□ -0.37
RPL4-202ENST00000561554 PRRX2Q99811 253 aa12.76□□□□□ -0.37
RPL4-202ENST00000561554 RANBP6O60518 1105 aaKnown RBP12.75□□□□□ -0.37
RPL4-202ENST00000561554 HOXD8P13378 290 aaPredicted RBP12.75□□□□□ -0.37
RPL4-202ENST00000561554 TCTN1Q2MV58 587 aa12.75□□□□□ -0.37
RPL4-202ENST00000561554 TTC41PQ6P2S7 1318 aa12.75□□□□□ -0.37
RPL4-202ENST00000561554 NSUN6Q8TEA1 469 aaKnown RBP12.75□□□□□ -0.37
RPL4-202ENST00000561554 CHMP4CQ96CF2 233 aa12.75□□□□□ -0.37
RPL4-202ENST00000561554 NSUN3Q9H649 340 aaKnown RBP12.75□□□□□ -0.37
RPL4-202ENST00000561554 HDAC6Q9UBN7 1215 aa12.75□□□□□ -0.37
RPL4-202ENST00000561554 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 H3BQ06 376 aaPredicted RBP12.74□□□□□ -0.37
RPL4-202ENST00000561554 SMARCA5O60264 1052 aaPredicted RBP12.74□□□□□ -0.37
RPL4-202ENST00000561554 SNHG28P0DPA3 235 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 PDHBP11177 359 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 PSEN2P49810 448 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 CHMP4BP1P59074 171 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 LAMC2Q13753 1193 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 MBTPS1Q14703 1052 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 PLEKHG4Q58EX7 1191 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 HERC4Q5GLZ8 1057 aaPredicted RBP12.74□□□□□ -0.37
RPL4-202ENST00000561554 ZNF618Q5T7W0 954 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.74□□□□□ -0.37
RPL4-202ENST00000561554 HFE2Q6ZVN8 426 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 BMP8AQ7Z5Y6 402 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 PPTC7Q8NI37 304 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 TTC14Q96N46 770 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 SEC62Q99442 399 aaKnown RBP12.74□□□□□ -0.37
RPL4-202ENST00000561554 TMEM47Q9BQJ4 181 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 MYO7AQ13402 2215 aa12.74□□□□□ -0.37
RPL4-202ENST00000561554 USP34Q70CQ2 3546 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms