RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 JAKMIP1Q96N16 626 aaKnown RBP14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 CTAGE1Q96RT6 745 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 WNT8AQ9H1J5 351 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 TRMT13Q9NUP7 481 aaKnown RBP14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 DDX41Q9UJV9 622 aaKnown RBP14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 SLC12A7Q9Y666 1083 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 KLF18A0A0U1RQI7 1052 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 GCOM1H8Y6P7 765 aaPredicted RBP14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 POLR2MP0CAP2 368 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 ZNF286BP0CG31 522 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 CYP2C9P11712 490 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 CSF2RAP15509 400 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 KIF5BP33176 963 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 APOBRQ0VD83 1088 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 TTLL4Q14679 1199 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 STXBP2Q15833 593 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 RNF20Q5VTR2 975 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 WWC2Q6AWC2 1192 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 FAM109BQ6ICB4 259 aaPredicted RBP14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 VSIG10LQ86VR7 867 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 KAT2BQ92831 832 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 RRP36Q96EU6 259 aaKnown RBP14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 IWS1Q96ST2 819 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 ALDH8A1Q9H2A2 487 aaPredicted RBP14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 SCN5AQ14524 2016 aa14.64□□□□□ -0.07
CHRNA3-208ENST00000561128 NKRFO15226 690 aaKnown RBP eCLIP14.63□□□□□ -0.07
CHRNA3-208ENST00000561128 TIMP1P01033 207 aa14.63□□□□□ -0.07
CHRNA3-208ENST00000561128 ACRP10323 421 aa14.63□□□□□ -0.07
CHRNA3-208ENST00000561128 UBA1P22314 1058 aaKnown RBP14.63□□□□□ -0.07
CHRNA3-208ENST00000561128 FPGSQ05932 587 aa14.63□□□□□ -0.07
CHRNA3-208ENST00000561128 NBPF20Q3BBV1 942 aa14.63□□□□□ -0.07
CHRNA3-208ENST00000561128 NOC4LQ9BVI4 516 aaKnown RBP14.63□□□□□ -0.07
CHRNA3-208ENST00000561128 MAF1Q9H063 256 aa14.63□□□□□ -0.07
CHRNA3-208ENST00000561128 PPP4R2Q9NY27 417 aa14.63□□□□□ -0.07
CHRNA3-208ENST00000561128 MRVI1Q9Y6F6 885 aa14.63□□□□□ -0.07
CHRNA3-208ENST00000561128 MROH7Q68CQ1 1323 aa14.63□□□□□ -0.07
CHRNA3-208ENST00000561128 MYH7BA7E2Y1 1941 aa14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 GOLGA8AA7E2F4 631 aa14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 GOLGA8BA8MQT2 603 aa14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 PPFIA3O75145 1194 aa14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 EIF3JO75822 258 aaKnown RBP14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 CABYRO75952 493 aa14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 GH1P01241 217 aa14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 CPT1AP50416 773 aa14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 HIC1Q14526 733 aa14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 TMTC2Q8N394 836 aa14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 PGBD1Q96JS3 809 aa14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 MTG1Q9BT17 334 aaPredicted RBP14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 POLR3EQ9NVU0 708 aa14.62□□□□□ -0.07
CHRNA3-208ENST00000561128 NID2Q14112 1375 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 ZBTB43O43298 467 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 ZEB2O60315 1214 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 GGPS1O95749 300 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 CALM1P0DP23 149 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 CALM2P0DP24 149 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 CALM3P0DP25 149 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 RPS6KB1P23443 525 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 SMARCA1P28370 1054 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 CCND2P30279 289 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 CCL23P55773 120 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 CHMP4BP1P59074 171 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 RTN1Q16799 776 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 HSDL1Q3SXM5 330 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 MFSD5Q6N075 450 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 Q6ZUG5 572 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 HEATR3Q7Z4Q2 680 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 BRF1Q92994 677 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 SCLYQ96I15 445 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 INPP4AQ96PE3 977 aaPredicted RBP14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 MPHOSPH6Q99547 160 aaKnown RBP14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 LZTS2Q9BRK4 669 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 LARP6Q9BRS8 491 aaKnown RBP14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 HIPK3Q9H422 1215 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 RTEL1Q9NZ71 1219 aa14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 SEC63Q9UGP8 760 aaKnown RBP14.61□□□□□ -0.07
CHRNA3-208ENST00000561128 STXBP3O00186 592 aa14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 PIK3CDO00329 1044 aa14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 DTNBO60941 627 aa14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 HOXD8P13378 290 aaPredicted RBP14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 ADD1P35611 737 aaKnown RBP14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 GNAQP50148 359 aa14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 FAM47CQ5HY64 1035 aa14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 TMEM240Q5SV17 173 aa14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 GDF6Q6KF10 455 aaPredicted RBP14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 DHX38Q92620 1227 aaKnown RBP14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 WNT8BQ93098 351 aa14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 EMID1Q96A84 441 aaPredicted RBP14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 RNPC3Q96LT9 517 aaKnown RBP14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 AGXT2Q9BYV1 514 aa14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 MAP3K20Q9NYL2 800 aaKnown RBP14.6□□□□□ -0.07
CHRNA3-208ENST00000561128 GBF1Q92538 1859 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 B4DLN1 442 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 TLR3O15455 904 aaKnown RBP14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 F2P00734 622 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 CASTP20810 708 aaKnown RBP14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 MRPL12P52815 198 aaKnown RBP14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 TOB2Q14106 344 aaPredicted RBP14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 KRT32Q14532 448 aa14.59□□□□□ -0.07
CHRNA3-208ENST00000561128 CELF3Q5SZQ8 465 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms