RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 FAM47AQ5JRC9 791 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 DNAJC10Q8IXB1 793 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 BLIDQ8IZY5 108 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 ARFGAP2Q8N6H7 521 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 ZNF622Q969S3 477 aaKnown RBP eCLIP18.2■□□□□ 0.56e-7■■□□□ 13.8
TPM1-228ENST00000560975 SEMA6BQ9H3T3 888 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 LCA5LO95447 670 aa18.19■□□□□ 0.5
TPM1-228ENST00000560975 SCTRP47872 440 aa18.19■□□□□ 0.5
TPM1-228ENST00000560975 DRP2Q13474 957 aa18.19■□□□□ 0.5
TPM1-228ENST00000560975 INF2Q27J81 1249 aa18.19■□□□□ 0.5
TPM1-228ENST00000560975 CCDC47Q96A33 483 aaKnown RBP18.19■□□□□ 0.5
TPM1-228ENST00000560975 TBC1D31Q96DN5 1066 aa18.19■□□□□ 0.5
TPM1-228ENST00000560975 TANGO6Q9C0B7 1094 aa18.19■□□□□ 0.5
TPM1-228ENST00000560975 PHF20L1A8MW92 1017 aa18.19■□□□□ 0.5
TPM1-228ENST00000560975 CTNNA1P35221 906 aaKnown RBP18.19■□□□□ 0.5
TPM1-228ENST00000560975 DYNLL1P63167 89 aaKnown RBP18.19■□□□□ 0.5
TPM1-228ENST00000560975 CDC37Q16543 378 aaPredicted RBP18.19■□□□□ 0.5
TPM1-228ENST00000560975 CNOT8Q9UFF9 292 aaKnown RBP18.19■□□□□ 0.5
TPM1-228ENST00000560975 CCDC194A0A1B0GVG4 234 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 PJA2O43164 708 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 ARID5AQ03989 594 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 CACNA2D3Q8IZS8 1091 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 TRIM9Q9C026 710 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 GGA2Q9UJY4 613 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 MTMR7Q9Y216 660 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 MAGEB6P1A0A0J9YX57 407 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 TRAPPC3O43617 180 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 CALM1P0DP23 149 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 CALM2P0DP24 149 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 CALM3P0DP25 149 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 HSPA9P38646 679 aaKnown RBP18.18■□□□□ 0.5
TPM1-228ENST00000560975 ERVK-9P63128 1117 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 NAA25Q14CX7 972 aa18.18■□□□□ 0.5
TPM1-228ENST00000560975 PFKFB3Q16875 520 aaPredicted RBP18.18■□□□□ 0.5
TPM1-228ENST00000560975 ZCRB1Q8TBF4 217 aaKnown RBP18.18■□□□□ 0.5
TPM1-228ENST00000560975 UBLCP1Q8WVY7 318 aaPredicted RBP18.18■□□□□ 0.5
TPM1-228ENST00000560975 DCDC2CA8MYV0 355 aa18.17■□□□□ 0.5
TPM1-228ENST00000560975 UAP1Q16222 522 aaPredicted RBP18.17■□□□□ 0.5
TPM1-228ENST00000560975 RAPGEF5Q92565 580 aa18.17■□□□□ 0.5
TPM1-228ENST00000560975 NOVA2Q9UNW9 492 aaKnown RBP18.17■□□□□ 0.5
TPM1-228ENST00000560975 TNS3Q68CZ2 1445 aa18.17■□□□□ 0.5
TPM1-228ENST00000560975 KLRC1P26715 233 aa18.17■□□□□ 0.5
TPM1-228ENST00000560975 GBP2P32456 591 aaPredicted RBP18.17■□□□□ 0.5
TPM1-228ENST00000560975 SLC4A8Q2Y0W8 1093 aa18.17■□□□□ 0.5
TPM1-228ENST00000560975 GIGYF2Q6Y7W6 1299 aaKnown RBP18.17■□□□□ 0.5
TPM1-228ENST00000560975 CPLX4Q7Z7G2 160 aa18.17■□□□□ 0.5
TPM1-228ENST00000560975 CABP7Q86V35 215 aa18.17■□□□□ 0.5
TPM1-228ENST00000560975 KIAA0895Q8NCT3 520 aa18.17■□□□□ 0.5
TPM1-228ENST00000560975 BAP1Q92560 729 aa18.17■□□□□ 0.5
TPM1-228ENST00000560975 TAF1DQ9H5J8 278 aaPredicted RBP18.17■□□□□ 0.5
TPM1-228ENST00000560975 PLCB1Q9NQ66 1216 aa18.17■□□□□ 0.5
TPM1-228ENST00000560975 SLC12A6Q9UHW9 1150 aa18.17■□□□□ 0.5
TPM1-228ENST00000560975 TSKSQ9UJT2 592 aa18.17■□□□□ 0.5
TPM1-228ENST00000560975 SKAP2O75563 359 aaPredicted RBP18.16■□□□□ 0.5
TPM1-228ENST00000560975 ZNF844Q08AG5 666 aa18.16■□□□□ 0.5
TPM1-228ENST00000560975 BYSLQ13895 437 aaKnown RBP18.16■□□□□ 0.5
TPM1-228ENST00000560975 FAXDC2Q96IV6 333 aa18.16■□□□□ 0.5
TPM1-228ENST00000560975 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.16■□□□□ 0.5
TPM1-228ENST00000560975 GOLPH3Q9H4A6 298 aa18.16■□□□□ 0.5
TPM1-228ENST00000560975 BAIAP2L1Q9UHR4 511 aa18.16■□□□□ 0.5
TPM1-228ENST00000560975 PDXDC1Q6P996 788 aa18.16■□□□□ 0.5
TPM1-228ENST00000560975 TEX11Q8IYF3 940 aa18.16■□□□□ 0.5
TPM1-228ENST00000560975 HVCN1Q96D96 273 aa18.16■□□□□ 0.5
TPM1-228ENST00000560975 RNF14Q9UBS8 474 aa18.16■□□□□ 0.5
TPM1-228ENST00000560975 DDAH1O94760 285 aa18.16■□□□□ 0.5
TPM1-228ENST00000560975 TXNRD1Q16881 649 aa18.16■□□□□ 0.5
TPM1-228ENST00000560975 ACCSLQ4AC99 568 aa18.16■□□□□ 0.5
TPM1-228ENST00000560975 NEUROG2Q9H2A3 272 aa18.16■□□□□ 0.5
TPM1-228ENST00000560975 FLT3P36888 993 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 MRPL12P52815 198 aaKnown RBP18.15■□□□□ 0.5
TPM1-228ENST00000560975 TNNC1P63316 161 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 ASTE1Q2TB18 679 aaPredicted RBP18.15■□□□□ 0.5
TPM1-228ENST00000560975 LRCH2Q5VUJ6 765 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 RNF10Q8N5U6 811 aaKnown RBP18.15■□□□□ 0.5
TPM1-228ENST00000560975 INPP4AQ96PE3 977 aaPredicted RBP18.15■□□□□ 0.5
TPM1-228ENST00000560975 AP1M1Q9BXS5 423 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 PACSIN1Q9BY11 444 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 MROH5Q6ZUA9 1318 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 ERVV-2B6SEH9 535 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 KCNK3O14649 394 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 PDE8AO60658 829 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 MAGOHP61326 146 aaKnown RBP18.15■□□□□ 0.5
TPM1-228ENST00000560975 PPP2R2AP63151 447 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 HGSNATQ68CP4 663 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 MSL1Q68DK7 614 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 CHADLQ6NUI6 762 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 CCDC50Q8IVM0 306 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 MDM1Q8TC05 714 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 MAGOHBQ96A72 148 aaKnown RBP18.15■□□□□ 0.5
TPM1-228ENST00000560975 ANAPC4Q9UJX5 808 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 FBXL5Q9UKA1 691 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 KCPQ6ZWJ8 1503 aa18.15■□□□□ 0.5
TPM1-228ENST00000560975 TMCO5BA8MYB1 307 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 H0YGN5 161 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 MYL1P05976 194 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 CALML3P27482 149 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 SATB1Q01826 763 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 MAN2A1Q16706 1144 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 HIBCHQ6NVY1 386 aaPredicted RBP18.14■□□□□ 0.49
TPM1-228ENST00000560975 USP38Q8NB14 1042 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms