RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PHACTR3Q96KR7 559 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 HAUS4Q9H6D7 363 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 MPP6Q9NZW5 540 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 TSC22D4Q9Y3Q8 395 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 RALGAPBQ86X10 1494 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 MBD4O95243 580 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 ZNF445P59923 1031 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 CATSPER3Q86XQ3 398 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 SNX2O60749 519 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 MFAP3P55082 362 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 TRIM71Q2Q1W2 868 aaKnown RBP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 SLC26A7Q8TE54 656 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 PAPOLBQ9NRJ5 636 aaKnown RBP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 ARMCX3Q9UH62 379 aaPredicted RBP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 V9GY48 417 aaPredicted RBP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 WDR64B1ANS9 1081 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 MED7O43513 233 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 ATP2B4P23634 1241 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 TAB3Q8N5C8 712 aaPredicted RBP14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 BLZF1Q9H2G9 400 aa14.95□□□□□ -0.02
CSPG4P12-202ENST00000559989 HSPA4LO95757 839 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 MYL7Q01449 175 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 ALKBH8Q96BT7 664 aaKnown RBP14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 SELENONQ9NZV5 590 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 ECEL1O95672 775 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 MMEP08473 750 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 IGBP1P78318 339 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 GLG1Q92896 1179 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 XPO4Q9C0E2 1151 aaKnown RBP14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 MYO1FO00160 1098 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 MAPK4P31152 587 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 PNOCQ13519 176 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 KSR2Q6VAB6 950 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 KRT27Q7Z3Y8 459 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 CASKIN1Q8WXD9 1431 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 H7C1D1 291 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 EFTUD2Q15029 972 aaKnown RBP eCLIP14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 HABP4Q5JVS0 413 aaKnown RBP14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 CADPS2Q86UW7 1296 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 GPIHBP1Q8IV16 184 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 CCNYQ8ND76 341 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 TUBGCP3Q96CW5 907 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 UIMC1Q96RL1 719 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 PDHA1P08559 390 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 TMOD1P28289 359 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 NBPF9Q3BBW0 867 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 PLD3Q8IV08 490 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 PBKQ96KB5 322 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 ATP8A1Q9Y2Q0 1164 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 EXOC1LA0A1B0GW35 172 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 POLR2FP61218 127 aaKnown RBP14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 GUCY1A3Q02108 690 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 ADCY2Q08462 1091 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 HORMAD1Q86X24 394 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 MEIS3Q99687 375 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 SMYD3Q9H7B4 428 aa14.94□□□□□ -0.02
CSPG4P12-202ENST00000559989 SLC1A4P43007 532 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 C10orf76Q5T2E6 689 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 NOSTRINQ8IVI9 506 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 APOBEC2Q9Y235 224 aaKnown RBP14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 UBXN8O00124 270 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 PSMA3P25788 255 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 MORF4L2Q15014 288 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 C17orf53Q8N3J3 647 aaPredicted RBP14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 STK17AQ9UEE5 414 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 IBTKQ9P2D0 1353 aaPredicted RBP14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 RASSF10A6NK89 507 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 RPN1P04843 607 aaKnown RBP14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 KRT72Q14CN4 511 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 TLK2Q86UE8 772 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 GINS4Q9BRT9 223 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 OSBPL10Q9BXB5 764 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 ARL4AP40617 200 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 RRM2BQ7LG56 351 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 TMEM245Q9H330 911 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 SEPT3Q9UH03 358 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 WASHC5Q12768 1159 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 TFCP2Q12800 502 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 MESDQ14696 234 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 C1orf146Q5VVC0 180 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 KRT39Q6A163 491 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 MTRQ99707 1265 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 HOXA7P31268 230 aaPredicted RBP14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 DEFA1P59665 94 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 DEFA3P59666 94 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 KDM4CQ9H3R0 1056 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 NDE1Q9NXR1 346 aa14.93□□□□□ -0.02
CSPG4P12-202ENST00000559989 MMS22LQ6ZRQ5 1243 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 BZW1Q7L1Q6 419 aaKnown RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 NCAPG2Q86XI2 1143 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 LRRC8AQ8IWT6 810 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 PPM1KQ8N3J5 372 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 GCNAQ96QF7 691 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 WDR91A4D1P6 747 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 H2AFZP0C0S5 128 aa14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 DLATP10515 647 aaKnown RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 NUP62P37198 522 aaPredicted RBP14.92□□□□□ -0.02
CSPG4P12-202ENST00000559989 EPHB1P54762 984 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms