RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 MUC6Q6W4X9 2439 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 LCTP09848 1927 aa19.47■□□□□ 0.71
PSEN1-224ENST00000559361 ATP2A2P16615 1042 aaKnown RBP19.46■□□□□ 0.71
PSEN1-224ENST00000559361 KCNQ1P51787 676 aa19.46■□□□□ 0.71
PSEN1-224ENST00000559361 TROAPQ12815 778 aa19.46■□□□□ 0.71
PSEN1-224ENST00000559361 GPATCH4Q5T3I0 446 aaKnown RBP19.46■□□□□ 0.71
PSEN1-224ENST00000559361 SLFN13Q68D06 897 aa19.46■□□□□ 0.71
PSEN1-224ENST00000559361 APOA5Q6Q788 366 aa19.46■□□□□ 0.71
PSEN1-224ENST00000559361 ZNF654Q8IZM8 581 aa19.46■□□□□ 0.71
PSEN1-224ENST00000559361 CHMP4CQ96CF2 233 aa19.46■□□□□ 0.71
PSEN1-224ENST00000559361 SCLYQ96I15 445 aa19.46■□□□□ 0.71
PSEN1-224ENST00000559361 PDGFCQ9NRA1 345 aa19.46■□□□□ 0.71
PSEN1-224ENST00000559361 PFKMP08237 780 aa19.45■□□□□ 0.7
PSEN1-224ENST00000559361 PDHBP11177 359 aa19.45■□□□□ 0.7
PSEN1-224ENST00000559361 KIF5BP33176 963 aa19.45■□□□□ 0.7
PSEN1-224ENST00000559361 SLC1A4P43007 532 aa19.45■□□□□ 0.7
PSEN1-224ENST00000559361 AK2P54819 239 aa19.45■□□□□ 0.7
PSEN1-224ENST00000559361 PSMC6P62333 389 aa19.45■□□□□ 0.7
PSEN1-224ENST00000559361 TOB2Q14106 344 aaPredicted RBP19.45■□□□□ 0.7
PSEN1-224ENST00000559361 TTLL4Q14679 1199 aa19.45■□□□□ 0.7
PSEN1-224ENST00000559361 TKFCQ3LXA3 575 aa19.45■□□□□ 0.7
PSEN1-224ENST00000559361 ASPRV1Q53RT3 343 aa19.45■□□□□ 0.7
PSEN1-224ENST00000559361 TMEM63BQ5T3F8 832 aa19.45■□□□□ 0.7
PSEN1-224ENST00000559361 MORC4Q8TE76 937 aa19.45■□□□□ 0.7
PSEN1-224ENST00000559361 ZNF274Q96GC6 653 aaPredicted RBP19.45■□□□□ 0.7
PSEN1-224ENST00000559361 RNF146Q9NTX7 359 aa19.45■□□□□ 0.7
PSEN1-224ENST00000559361 NID2Q14112 1375 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 SCN10AQ9Y5Y9 1956 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 KLF18A0A0U1RQI7 1052 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 CCDC196A0A1B0GTZ2 297 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 TMEM232C9JQI7 657 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 ZBTB43O43298 467 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 PLA2G6O60733 806 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 GNAQP50148 359 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 STAT2P52630 851 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 FAM160B2Q86V87 743 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 MICALL1Q8N3F8 863 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 CTCFLQ8NI51 663 aaPredicted RBP19.44■□□□□ 0.7
PSEN1-224ENST00000559361 CHURC1Q8WUH1 139 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 TRERF1Q96PN7 1200 aa19.44■□□□□ 0.7
PSEN1-224ENST00000559361 DDX49Q9Y6V7 483 aaKnown RBP19.44■□□□□ 0.7
PSEN1-224ENST00000559361 RFXAPO00287 272 aa19.43■□□□□ 0.7
PSEN1-224ENST00000559361 PARP1P09874 1014 aaKnown RBP19.43■□□□□ 0.7
PSEN1-224ENST00000559361 LZTS2Q9BRK4 669 aa19.43■□□□□ 0.7
PSEN1-224ENST00000559361 LRFN3Q9BTN0 628 aa19.43■□□□□ 0.7
PSEN1-224ENST00000559361 EPHX3Q9H6B9 360 aa19.43■□□□□ 0.7
PSEN1-224ENST00000559361 GPHNQ9NQX3 736 aaPredicted RBP19.43■□□□□ 0.7
PSEN1-224ENST00000559361 RBM28Q9NW13 759 aaKnown RBP19.43■□□□□ 0.7
PSEN1-224ENST00000559361 CYP39A1Q9NYL5 469 aa19.43■□□□□ 0.7
PSEN1-224ENST00000559361 COG5Q9UP83 839 aa19.43■□□□□ 0.7
PSEN1-224ENST00000559361 LIMCH1Q9UPQ0 1083 aa19.43■□□□□ 0.7
PSEN1-224ENST00000559361 EPOPA6NHQ4 379 aa19.42■□□□□ 0.7
PSEN1-224ENST00000559361 GOLGA8BA8MQT2 603 aa19.42■□□□□ 0.7
PSEN1-224ENST00000559361 ZBBXA8MT70 800 aa19.42■□□□□ 0.7
PSEN1-224ENST00000559361 TLL1O43897 1013 aa19.42■□□□□ 0.7
PSEN1-224ENST00000559361 CA3P07451 260 aa19.42■□□□□ 0.7
PSEN1-224ENST00000559361 SUPT20HL2P0C7V6 817 aa19.42■□□□□ 0.7
PSEN1-224ENST00000559361 ZNF543Q08ER8 600 aa19.42■□□□□ 0.7
PSEN1-224ENST00000559361 APOBRQ0VD83 1088 aa19.42■□□□□ 0.7
PSEN1-224ENST00000559361 GRM4Q14833 912 aa19.42■□□□□ 0.7
PSEN1-224ENST00000559361 FBXO16Q8IX29 292 aaPredicted RBP19.42■□□□□ 0.7
PSEN1-224ENST00000559361 PHOSPHO2Q8TCD6 241 aa19.42■□□□□ 0.7
PSEN1-224ENST00000559361 ZSCAN31Q96LW9 406 aaPredicted RBP19.42■□□□□ 0.7
PSEN1-224ENST00000559361 SENP2Q9HC62 589 aa19.42■□□□□ 0.7
PSEN1-224ENST00000559361 VTA1Q9NP79 307 aa19.42■□□□□ 0.7
PSEN1-224ENST00000559361 TRIP12Q14669 1992 aaPredicted RBP19.41■□□□□ 0.7
PSEN1-224ENST00000559361 GTPBP6O43824 516 aaPredicted RBP19.41■□□□□ 0.7
PSEN1-224ENST00000559361 DHX16O60231 1041 aaKnown RBP19.41■□□□□ 0.7
PSEN1-224ENST00000559361 CYP2C9P11712 490 aa19.41■□□□□ 0.7
PSEN1-224ENST00000559361 METAP2P50579 478 aaKnown RBP eCLIP19.41■□□□□ 0.7
PSEN1-224ENST00000559361 CCDC96Q2M329 555 aa19.41■□□□□ 0.7
PSEN1-224ENST00000559361 DUSP28Q4G0W2 176 aa19.41■□□□□ 0.7
PSEN1-224ENST00000559361 MUM1L1Q5H9M0 696 aa19.41■□□□□ 0.7
PSEN1-224ENST00000559361 EEPD1Q7L9B9 569 aa19.41■□□□□ 0.7
PSEN1-224ENST00000559361 MICU3Q86XE3 530 aa19.41■□□□□ 0.7
PSEN1-224ENST00000559361 FANCBQ8NB91 859 aa19.41■□□□□ 0.7
PSEN1-224ENST00000559361 SH2B1Q9NRF2 756 aaPredicted RBP19.41■□□□□ 0.7
PSEN1-224ENST00000559361 TRMT13Q9NUP7 481 aaKnown RBP19.41■□□□□ 0.7
PSEN1-224ENST00000559361 BRPF3Q9ULD4 1205 aa19.41■□□□□ 0.7
PSEN1-224ENST00000559361 ALAS1P13196 640 aa19.4■□□□□ 0.7
PSEN1-224ENST00000559361 SMARCA1P28370 1054 aa19.4■□□□□ 0.7
PSEN1-224ENST00000559361 PDIA3P30101 505 aaKnown RBP19.4■□□□□ 0.7
PSEN1-224ENST00000559361 PURAQ00577 322 aaKnown RBP19.4■□□□□ 0.7
PSEN1-224ENST00000559361 SKIV2LQ15477 1246 aaKnown RBP19.4■□□□□ 0.7
PSEN1-224ENST00000559361 BTNL9Q6UXG8 535 aa19.4■□□□□ 0.7
PSEN1-224ENST00000559361 SLC9A7Q96T83 725 aa19.4■□□□□ 0.7
PSEN1-224ENST00000559361 RBM47A0AV96 593 aaKnown RBP19.39■□□□□ 0.69
PSEN1-224ENST00000559361 PALM3A6NDB9 673 aaPredicted RBP19.39■□□□□ 0.69
PSEN1-224ENST00000559361 GOLGA8AA7E2F4 631 aa19.39■□□□□ 0.69
PSEN1-224ENST00000559361 ARHGEF15O94989 841 aa19.39■□□□□ 0.69
PSEN1-224ENST00000559361 RFC2P35250 354 aa19.39■□□□□ 0.69
PSEN1-224ENST00000559361 TAP1Q03518 808 aa19.39■□□□□ 0.69
PSEN1-224ENST00000559361 RTN1Q16799 776 aa19.39■□□□□ 0.69
PSEN1-224ENST00000559361 KRT40Q6A162 431 aa19.39■□□□□ 0.69
PSEN1-224ENST00000559361 CPLX2Q6PUV4 134 aaKnown RBP19.39■□□□□ 0.69
PSEN1-224ENST00000559361 DEFB128Q7Z7B8 93 aa19.39■□□□□ 0.69
PSEN1-224ENST00000559361 SNX21Q969T3 373 aa19.39■□□□□ 0.69
PSEN1-224ENST00000559361 SLKQ9H2G2 1235 aaPredicted RBP19.39■□□□□ 0.69
PSEN1-224ENST00000559361 POLR3EQ9NVU0 708 aa19.39■□□□□ 0.69
PSEN1-224ENST00000559361 MAD2L2Q9UI95 211 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms