RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 VSIG10LQ86VR7 867 aa20.51■□□□□ 0.87
CLPX-203ENST00000558958 POTEDQ86YR6 584 aa20.51■□□□□ 0.87
CLPX-203ENST00000558958 CYP2W1Q8TAV3 490 aa20.51■□□□□ 0.87
CLPX-203ENST00000558958 LENG9Q96B70 501 aa20.51■□□□□ 0.87
CLPX-203ENST00000558958 PLXNB2O15031 1838 aa20.51■□□□□ 0.87
CLPX-203ENST00000558958 IGLV3-22A0A075B6J6 115 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 COBLO75128 1261 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 ME1P48163 572 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 NFKBIBQ15653 356 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 ZNF792Q3KQV3 632 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 PRR16Q569H4 304 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 JMYQ8N9B5 988 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 MTMR9Q96QG7 549 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 LMBRD1Q9NUN5 540 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 PCDHA7Q9UN72 937 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 UBIAD1Q9Y5Z9 338 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 ZNFX1Q9P2E3 1918 aaKnown RBP20.5■□□□□ 0.87
CLPX-203ENST00000558958 DDX11L8A8MPP1 907 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 MEIS1O00470 390 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 MYCLP12524 364 aaPredicted RBP20.5■□□□□ 0.87
CLPX-203ENST00000558958 EDNRBP24530 442 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 MORN1Q5T089 497 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 ARL6IP4Q66PJ3 421 aaKnown RBP20.5■□□□□ 0.87
CLPX-203ENST00000558958 ZFP91Q96JP5 570 aaPredicted RBP20.5■□□□□ 0.87
CLPX-203ENST00000558958 MXRA8Q9BRK3 442 aa20.5■□□□□ 0.87
CLPX-203ENST00000558958 FBXO2Q9UK22 296 aaPredicted RBP20.5■□□□□ 0.87
CLPX-203ENST00000558958 LOC102724159A0A0B4J2E5 919 aa20.49■□□□□ 0.87
CLPX-203ENST00000558958 OR52Z1P0C646 297 aa20.49■□□□□ 0.87
CLPX-203ENST00000558958 ITGB5P18084 799 aa20.49■□□□□ 0.87
CLPX-203ENST00000558958 PRPHP41219 470 aa20.49■□□□□ 0.87
CLPX-203ENST00000558958 LACTBP83111 547 aaPredicted RBP20.49■□□□□ 0.87
CLPX-203ENST00000558958 PWP2Q15269 919 aaKnown RBP20.49■□□□□ 0.87
CLPX-203ENST00000558958 CALCRLQ16602 461 aa20.49■□□□□ 0.87
CLPX-203ENST00000558958 NIPA1Q7RTP0 329 aa20.49■□□□□ 0.87
CLPX-203ENST00000558958 KRI1Q8N9T8 703 aaKnown RBP20.49■□□□□ 0.87
CLPX-203ENST00000558958 KCNMB3Q9NPA1 279 aa20.49■□□□□ 0.87
CLPX-203ENST00000558958 SAGE1Q9NXZ1 904 aa20.49■□□□□ 0.87
CLPX-203ENST00000558958 SRPRBQ9Y5M8 271 aaKnown RBP20.49■□□□□ 0.87
CLPX-203ENST00000558958 DDX49Q9Y6V7 483 aaKnown RBP20.49■□□□□ 0.87
CLPX-203ENST00000558958 PCNTO95613 3336 aa20.48■□□□□ 0.87
CLPX-203ENST00000558958 ZNF236Q9UL36 1845 aa20.48■□□□□ 0.87
CLPX-203ENST00000558958 B4DLN1 442 aa20.48■□□□□ 0.87
CLPX-203ENST00000558958 TNPO2O14787 897 aaKnown RBP20.48■□□□□ 0.87
CLPX-203ENST00000558958 GADD45BO75293 160 aaPredicted RBP20.48■□□□□ 0.87
CLPX-203ENST00000558958 STAM2O75886 525 aa20.48■□□□□ 0.87
CLPX-203ENST00000558958 ECM2O94769 699 aaPredicted RBP20.48■□□□□ 0.87
CLPX-203ENST00000558958 CTGFP29279 349 aa20.48■□□□□ 0.87
CLPX-203ENST00000558958 SP3Q02447 781 aa20.48■□□□□ 0.87
CLPX-203ENST00000558958 AXDND1Q5T1B0 1012 aaPredicted RBP20.48■□□□□ 0.87
CLPX-203ENST00000558958 DPP9Q86TI2 863 aa20.48■□□□□ 0.87
CLPX-203ENST00000558958 PLA2G4DQ86XP0 818 aa20.48■□□□□ 0.87
CLPX-203ENST00000558958 HAS1Q92839 578 aa20.48■□□□□ 0.87
CLPX-203ENST00000558958 FERMT2Q96AC1 680 aa20.48■□□□□ 0.87
CLPX-203ENST00000558958 DIS3Q9Y2L1 958 aaKnown RBP20.48■□□□□ 0.87
CLPX-203ENST00000558958 TBX3O15119 743 aa20.47■□□□□ 0.87
CLPX-203ENST00000558958 SETQ01105 290 aaPredicted RBP20.47■□□□□ 0.87
CLPX-203ENST00000558958 MAP2K5Q13163 448 aa20.47■□□□□ 0.87
CLPX-203ENST00000558958 STXBP2Q15833 593 aa20.47■□□□□ 0.87
CLPX-203ENST00000558958 IL17AQ16552 155 aa20.47■□□□□ 0.87
CLPX-203ENST00000558958 ADALQ6DHV7 355 aa20.47■□□□□ 0.87
CLPX-203ENST00000558958 ZNF467Q7Z7K2 595 aaPredicted RBP20.47■□□□□ 0.87
CLPX-203ENST00000558958 ETNPPLQ8TBG4 499 aa20.47■□□□□ 0.87
CLPX-203ENST00000558958 MORC4Q8TE76 937 aa20.47■□□□□ 0.87
CLPX-203ENST00000558958 USP6NLQ92738 828 aa20.47■□□□□ 0.87
CLPX-203ENST00000558958 INPP4AQ96PE3 977 aaPredicted RBP20.47■□□□□ 0.87
CLPX-203ENST00000558958 MPHOSPH6Q99547 160 aaKnown RBP20.47■□□□□ 0.87
CLPX-203ENST00000558958 JADE2Q9NQC1 790 aa20.47■□□□□ 0.87
CLPX-203ENST00000558958 GJD2Q9UKL4 321 aa20.47■□□□□ 0.87
CLPX-203ENST00000558958 MSH4O15457 936 aa20.46■□□□□ 0.87
CLPX-203ENST00000558958 CUTAO60888 179 aa20.46■□□□□ 0.87
CLPX-203ENST00000558958 EIF3JO75822 258 aaKnown RBP20.46■□□□□ 0.87
CLPX-203ENST00000558958 PSMC4P43686 418 aa20.46■□□□□ 0.87
CLPX-203ENST00000558958 FCGRTP55899 365 aa20.46■□□□□ 0.87
CLPX-203ENST00000558958 UBE2HP62256 183 aa20.46■□□□□ 0.87
CLPX-203ENST00000558958 MAP2K1Q02750 393 aaPredicted RBP20.46■□□□□ 0.87
CLPX-203ENST00000558958 GRIN1Q05586 938 aa20.46■□□□□ 0.87
CLPX-203ENST00000558958 PDE4DQ08499 809 aa20.46■□□□□ 0.87
CLPX-203ENST00000558958 CLIC6Q96NY7 704 aa20.46■□□□□ 0.87
CLPX-203ENST00000558958 WDR11Q9BZH6 1224 aa20.46■□□□□ 0.87
CLPX-203ENST00000558958 ARHGAP39Q9C0H5 1083 aa20.46■□□□□ 0.87
CLPX-203ENST00000558958 SLC5A4Q9NY91 659 aa20.46■□□□□ 0.87
CLPX-203ENST00000558958 ASB14A6NK59 587 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 RGS20O76081 388 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 HOXC6P09630 235 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 ARP10275 920 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 DTHD1Q6ZMT9 781 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 SLFN12Q8IYM2 578 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 SOCS4Q8WXH5 440 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 GPRASP2Q96D09 838 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 TRIM47Q96LD4 638 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 FAM20AQ96MK3 541 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 NUDT12Q9BQG2 462 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 KCNH7Q9NS40 1196 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 DOCK3Q8IZD9 2030 aa20.45■□□□□ 0.86
CLPX-203ENST00000558958 A0A1W2PQ27 194 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 A0A1W2PQ64 194 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 A0A1W2PQD8 194 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 VWA3AA6NCI4 1184 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 GOLGA6L4A6NEF3 574 aa20.44■□□□□ 0.86
CLPX-203ENST00000558958 GPR25O00155 361 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms