RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 MICU3Q86XE3 530 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 TMTC2Q8N394 836 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 SMARCC2Q8TAQ2 1214 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 DCAF4Q8WV16 495 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 GTF3C6Q969F1 213 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 UBA5Q9GZZ9 404 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 RIOX1Q9H6W3 641 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 KAT14Q9H8E8 782 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 AS3MTQ9HBK9 375 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 ARHGEF10LQ9HCE6 1279 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 LIMCH1Q9UPQ0 1083 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 SLC12A7Q9Y666 1083 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 ZNF536O15090 1300 aa8.44□□□□□ -1.06
TRAF3-206ENST00000558880 FRMPD2Q68DX3 1309 aaPredicted RBP8.44□□□□□ -1.06
TRAF3-206ENST00000558880 ATAD5Q96QE3 1844 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 GOLGA8BA8MQT2 603 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 MEN1O00255 615 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 WDR46O15213 610 aaKnown RBP8.43□□□□□ -1.06
TRAF3-206ENST00000558880 ZBTB43O43298 467 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 JAK2O60674 1132 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 PPFIA3O75145 1194 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 BMP3P12645 472 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 SOX11P35716 441 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 TM4SF4P48230 202 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 CCT2P78371 535 aaKnown RBP8.43□□□□□ -1.06
TRAF3-206ENST00000558880 CAP1Q01518 475 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 STK3Q13188 491 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 SNAPC2Q13487 334 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 NSUN7Q8NE18 718 aaKnown RBP8.43□□□□□ -1.06
TRAF3-206ENST00000558880 CD99L2Q8TCZ2 262 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 ADAMTS19Q8TE59 1207 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 LPAR1Q92633 364 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 P2RX7Q99572 595 aaKnown RBP8.43□□□□□ -1.06
TRAF3-206ENST00000558880 ALG2Q9H553 416 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 RPAP3Q9H6T3 665 aaPredicted RBP8.43□□□□□ -1.06
TRAF3-206ENST00000558880 JMJD4Q9H9V9 463 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 AGTPBP1Q9UPW5 1226 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 MTMR7Q9Y216 660 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 CNTNAP5Q8WYK1 1306 aa8.43□□□□□ -1.06
TRAF3-206ENST00000558880 RLFQ13129 1914 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 KIAA0100Q14667 2235 aaKnown RBP8.42□□□□□ -1.06
TRAF3-206ENST00000558880 CCL15-CCL14A0A0B4J2E2 113 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 ERICH2A1L162 156 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 CCDC69A6NI79 296 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 GOLGA8AA7E2F4 631 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 KLRF2D3W0D1 207 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 OPLAHO14841 1288 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 CYP2C8P10632 490 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 IFNAR1P17181 557 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 SLC1A4P43007 532 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 GTF2A2P52657 109 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 USP14P54578 494 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 SNAP25P60880 206 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 SART3Q15020 963 aaKnown RBP8.42□□□□□ -1.06
TRAF3-206ENST00000558880 ANKRD1Q15327 319 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 CCL15Q16663 113 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 NOM1Q5C9Z4 860 aaKnown RBP8.42□□□□□ -1.06
TRAF3-206ENST00000558880 LBX2Q6XYB7 198 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 CATIPQ7Z7H3 387 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 ANKRD23Q86SG2 305 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 ADGRF4Q8IZF3 695 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 NUP133Q8WUM0 1156 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 ATG4CQ96DT6 458 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 AIFM3Q96NN9 605 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 ASCC2Q9H1I8 757 aaPredicted RBP8.42□□□□□ -1.06
TRAF3-206ENST00000558880 RANBP17Q9H2T7 1088 aaKnown RBP8.42□□□□□ -1.06
TRAF3-206ENST00000558880 TXNRD2Q9NNW7 524 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 RAB6BQ9NRW1 208 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 BTBD7Q9P203 1132 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 RBPJLQ9UBG7 517 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 PPP1R9AQ9ULJ8 1098 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 PRR12Q9ULL5 1215 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 PTPN22Q9Y2R2 807 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 LOC285556D6RIA3 1793 aa8.42□□□□□ -1.06
TRAF3-206ENST00000558880 PTPRFP10586 1907 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 hCG_1642624A0A1W2PR95 340 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 USP17L15C9J2P7 530 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 USP17L13C9JLJ4 530 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 TMEM232C9JQI7 657 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 USP17L11C9JVI0 530 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 USP17L18D6R9N7 530 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 USP17L22D6RA61 530 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 USP17L17D6RBQ6 530 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 USP17L19D6RCP7 530 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 USP17L20D6RJB6 530 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 K7ELQ4 463 aaPredicted RBP8.41□□□□□ -1.06
TRAF3-206ENST00000558880 TERTO14746 1132 aaKnown RBP8.41□□□□□ -1.06
TRAF3-206ENST00000558880 PARP1P09874 1014 aaKnown RBP8.41□□□□□ -1.06
TRAF3-206ENST00000558880 CETPP11597 493 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 SMARCA1P28370 1054 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 DDIT3P35638 169 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 METAP2P50579 478 aaKnown RBP eCLIP8.41□□□□□ -1.06
TRAF3-206ENST00000558880 USP17L24Q0WX57 530 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 NPY5RQ15761 445 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 RTN1Q16799 776 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 ASPRV1Q53RT3 343 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 NFXL1Q6ZNB6 911 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 CYP2U1Q7Z449 544 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 CCDC83Q8IWF9 413 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 PLPP7Q8NBV4 271 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms