RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 KAT2BQ92831 832 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 TCP11L1Q9NUJ3 509 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 LMCD1Q9NZU5 365 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 PI4K2BG5E9Z4 385 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 GH1P01241 217 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 FGAP02671 866 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 CXCL10P02778 98 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 GOLGA8HP0CJ92 632 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 CKBP12277 381 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 CASTP20810 708 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 ARHGAP1Q07960 439 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 ALX1Q15699 326 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 FAM117BQ6P1L5 589 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 CNKSR3Q6P9H4 555 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 TGS1Q96RS0 853 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 RAD9AQ99638 391 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 CPVLQ9H3G5 476 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 UBE2ZQ9H832 354 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 GTF2IRD1Q9UHL9 959 aa10.6□□□□□ -0.71
HNRNPC-227ENST00000556897 ABHD14A-ACY1A0A1B0GW23 586 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 LINC01553A4QN01 128 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 PARNO95453 639 aaKnown RBP10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 SNHG28P0DPA3 235 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 KCNA5P22460 613 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 HAND2P61296 217 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 ERVK-21P61565 698 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 RBL2Q08999 1139 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 GJD3Q8N144 294 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 C7orf31Q8N865 590 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 RGS22Q8NE09 1264 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 SYTL5Q8TDW5 730 aaPredicted RBP10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 TBC1D5Q92609 795 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 FAM227BQ96M60 508 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 TAAR1Q96RJ0 339 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 CRBNQ96SW2 442 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 UBA5Q9GZZ9 404 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 COL20A1Q9P218 1284 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 HDAC6Q9UBN7 1215 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 PCDHB15Q9Y5E8 787 aa10.59□□□□□ -0.71
HNRNPC-227ENST00000556897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 ZNF286BP0CG31 522 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 IKBKEQ14164 716 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 MBTPS1Q14703 1052 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 CDC37Q16543 378 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 DGKDQ16760 1214 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 LEXMQ3ZCV2 418 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 ZNF618Q5T7W0 954 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 TRAF7Q6Q0C0 670 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 FAM178BQ8IXR5 827 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 NSUN6Q8TEA1 469 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 WNT8BQ93098 351 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 EVI5LQ96CN4 794 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 TTC14Q96N46 770 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 ALG1Q9BT22 464 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 HELLSQ9NRZ9 838 aa10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 DDX41Q9UJV9 622 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-227ENST00000556897 A0A0D9SFI3 127 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 EFCAB14O75071 495 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 HSPD1P10809 573 aaKnown RBP10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 IL9P15248 144 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 SSTR3P32745 418 aaPredicted RBP10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 PSEN2P49810 448 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 ZNF200P98182 395 aaPredicted RBP10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 PTK7Q13308 1070 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 MFSD10Q14728 455 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 STXBP2Q15833 593 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 KIAA0753Q2KHM9 967 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 MCMDC2Q4G0Z9 681 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 GPATCH4Q5T3I0 446 aaKnown RBP10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 PTCRAQ6ISU1 281 aaPredicted RBP10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.57□□□□□ -0.724e-7■■■■□ 21.4
HNRNPC-227ENST00000556897 MFSD6Q6ZSS7 791 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 TBC1D10CQ8IV04 446 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 EMID1Q96A84 441 aaPredicted RBP10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 IWS1Q96ST2 819 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 RMDN3Q96TC7 470 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 ZKSCAN3Q9BRR0 538 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 C17orf80Q9BSJ5 609 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 KATNAL1Q9BW62 490 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 MYO7AQ13402 2215 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 ABCB11O95342 1321 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 SALL3Q9BXA9 1300 aa10.57□□□□□ -0.72
HNRNPC-227ENST00000556897 SIP14410 1827 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 PRR33A8MZF0 331 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 HAS3O00219 553 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 LGR5O75473 907 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 F2P00734 622 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 EIF2AK2P19525 551 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 HIC1Q14526 733 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 TRIM71Q2Q1W2 868 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 ARHGEF16Q5VV41 709 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 ZNF589Q86UQ0 364 aaPredicted RBP10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 ALYREFQ86V81 257 aaKnown RBP10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 MCF2L2Q86YR7 1114 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 ADGRF4Q8IZF3 695 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 MYOCDQ8IZQ8 938 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 FBXO22Q8NEZ5 403 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 PPTC7Q8NI37 304 aa10.56□□□□□ -0.72
HNRNPC-227ENST00000556897 UIMC1Q96RL1 719 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms