RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 MCM4P33991 863 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 PCBP3P57721 371 aaKnown RBP6.32□□□□□ -1.4
ATXN3-243ENST00000556671 VPS72Q15906 364 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 LRRFIP1Q32MZ4 808 aaKnown RBP6.32□□□□□ -1.4
ATXN3-243ENST00000556671 BBS9Q3SYG4 887 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 AMIGO3Q86WK7 504 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 NKD1Q969G9 470 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 MAP6Q96JE9 813 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 ZNF512BQ96KM6 892 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-243ENST00000556671 PRDM14Q9GZV8 571 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 ANTXR1Q9H6X2 564 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 KNSTRNQ9Y448 316 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 BCL9LQ86UU0 1499 aa6.32□□□□□ -1.4
ATXN3-243ENST00000556671 EDC4Q6P2E9 1401 aaKnown RBP6.32□□□□□ -1.4
ATXN3-243ENST00000556671 COL18A1P39060 1754 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 NRAPQ86VF7 1730 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 CD163L1Q9NR16 1453 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 NRDCO43847 1150 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 SEMA7AO75326 666 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 USP2O75604 605 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-243ENST00000556671 PRAMEF1O95521 474 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 EFEMP2O95967 443 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 PDE6BP35913 854 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 ZEB1P37275 1124 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-243ENST00000556671 KIR2DL1P43626 348 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-243ENST00000556671 KIR2DL2P43627 348 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-243ENST00000556671 LINC00310P59036 64 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 RRS1Q15050 365 aaKnown RBP6.31□□□□□ -1.4
ATXN3-243ENST00000556671 ZNF605Q86T29 641 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 NLRX1Q86UT6 975 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 MORC1Q86VD1 984 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 TMEM192Q8IY95 271 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 TMEM87AQ8NBN3 555 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 EAF1Q96JC9 268 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-243ENST00000556671 ZMYM5Q9UJ78 669 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 NRKQ7Z2Y5 1582 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 ANKRD36BQ8N2N9 1353 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 NINLQ9Y2I6 1382 aa6.31□□□□□ -1.4
ATXN3-243ENST00000556671 ANKRD26Q9UPS8 1709 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 CGNL1Q0VF96 1302 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 CAMTA1Q9Y6Y1 1673 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 SSU72P8A0A1W2PR75 194 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 SYPP08247 313 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 ZNF16P17020 682 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-243ENST00000556671 GALK1P51570 392 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 DLG4P78352 724 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 CC2D1BQ5T0F9 858 aaKnown RBP6.3□□□□□ -1.4
ATXN3-243ENST00000556671 TMCO4Q5TGY1 634 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 CIAPIN1Q6FI81 312 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 ARHGEF25Q86VW2 580 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 KIAA0825Q8IV33 1275 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 SPON2Q9BUD6 331 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 ATRNO75882 1429 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 NSD3Q9BZ95 1437 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 SLIT2O94813 1529 aa6.3□□□□□ -1.4
ATXN3-243ENST00000556671 USP19O94966 1318 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 KIF7Q2M1P5 1343 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 SPATA31A5Q5VU36 1347 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 SPATA31A7Q8IWB4 1347 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 TEX51A0A1B0GUA7 166 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 GLI3P10071 1580 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 ZPBP2Q6X784 338 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 SSH2Q76I76 1423 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 KRT27Q7Z3Y8 459 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 TCP11L2Q8N4U5 519 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 HHIPL1Q96JK4 782 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 SLC6A18Q96N87 628 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 SLC9A7Q96T83 725 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 CRTAC1Q9NQ79 661 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 CHST7Q9NS84 486 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 MINPP1Q9UNW1 487 aa6.29□□□□□ -1.4
ATXN3-243ENST00000556671 SPATA31A1Q5TZJ5 1347 aa6.28□□□□□ -1.4
ATXN3-243ENST00000556671 SBF2Q86WG5 1849 aa6.28□□□□□ -1.4
ATXN3-243ENST00000556671 EXOC5O00471 708 aa6.28□□□□□ -1.4
ATXN3-243ENST00000556671 FKTNO75072 461 aa6.28□□□□□ -1.4
ATXN3-243ENST00000556671 SLC14A2Q15849 920 aa6.28□□□□□ -1.4
ATXN3-243ENST00000556671 CEP128Q6ZU80 1094 aa6.28□□□□□ -1.4
ATXN3-243ENST00000556671 SIRT2Q8IXJ6 389 aa6.28□□□□□ -1.4
ATXN3-243ENST00000556671 IP6K1Q92551 441 aa6.28□□□□□ -1.4
ATXN3-243ENST00000556671 FCRL2Q96LA5 508 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-243ENST00000556671 MKRN2Q9H000 416 aaKnown RBP6.28□□□□□ -1.4
ATXN3-243ENST00000556671 GCM1Q9NP62 436 aa6.28□□□□□ -1.4
ATXN3-243ENST00000556671 PRR13Q9NZ81 148 aa6.28□□□□□ -1.4
ATXN3-243ENST00000556671 ZNRF3Q9ULT6 936 aa6.28□□□□□ -1.4
ATXN3-243ENST00000556671 PCDHB12Q9Y5F1 795 aa6.28□□□□□ -1.4
ATXN3-243ENST00000556671 MAP3K19Q56UN5 1328 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 VIRMAQ69YN4 1812 aaKnown RBP6.27□□□□□ -1.41
ATXN3-243ENST00000556671 WNK3Q9BYP7 1800 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 RGS12O14924 1447 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 SLIT3O75094 1523 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 OR14I1A6ND48 311 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 HRKO00198 91 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 NUAK1O60285 661 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 ZNF76P36508 570 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 DDX10Q13206 875 aaKnown RBP6.27□□□□□ -1.41
ATXN3-243ENST00000556671 DDB1Q16531 1140 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 ADGRF1Q5T601 910 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 INTS3Q68E01 1043 aaKnown RBP6.27□□□□□ -1.41
ATXN3-243ENST00000556671 GFOD1Q9NXC2 390 aa6.27□□□□□ -1.41
ATXN3-243ENST00000556671 TNFRSF10DQ9UBN6 386 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms