RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 WDR93Q6P2C0 686 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 SV2BQ7L1I2 683 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 PTF1AQ7RTS3 328 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 TRAPPC11Q7Z392 1133 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 EIF3CQ99613 913 aaKnown RBP7.8□□□□□ -1.16
TDP1-213ENST00000555880 DUSP9Q99956 384 aaKnown RBP7.8□□□□□ -1.16
TDP1-213ENST00000555880 PDE11AQ9HCR9 933 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 ABCB6Q9NP58 842 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 CWC15Q9P013 229 aaKnown RBP7.8□□□□□ -1.16
TDP1-213ENST00000555880 STK17AQ9UEE5 414 aa7.8□□□□□ -1.16
TDP1-213ENST00000555880 REXO2Q9Y3B8 237 aaKnown RBP7.8□□□□□ -1.16
TDP1-213ENST00000555880 DDX60LQ5H9U9 1706 aaKnown RBP7.8□□□□□ -1.16
TDP1-213ENST00000555880 SNED1Q8TER0 1413 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 ANO9A1A5B4 782 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 USO1O60763 962 aaKnown RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 ABL1P00519 1130 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 ADCY7P51828 1080 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 HERVK_113P62684 666 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 VSNL1P62760 191 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 CDK17Q00537 523 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 SLC35G1Q2M3R5 365 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 COBLL1Q53SF7 1204 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 FIGNQ5HY92 759 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 ANKRD40Q6AI12 368 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 WDR59Q6PJI9 974 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 C15orf52Q6ZUT6 534 aaKnown RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 SMIM5Q71RC9 77 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 KRT27Q7Z3Y8 459 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 CCDC84Q86UT8 332 aaPredicted RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 GOLGA6L1Q8N7Z2 621 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 TBCKQ8TEA7 893 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 ARHGEF1Q92888 912 aaKnown RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 CCDC42Q96M95 316 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 ERGIC2Q96RQ1 377 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 RTFDC1Q9BY42 306 aaPredicted RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 NHEJ1Q9H9Q4 299 aaPredicted RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 ZCCHC17Q9NP64 241 aaKnown RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 PSD3Q9NYI0 1048 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 TRIM10Q9UDY6 481 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 LRWD1Q9UFC0 647 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 L1RE1Q9UN81 338 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 GPR75-ASB3A0A0A6YYF3 556 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 PVALEFA0A1B0GWK0 134 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 TARSL2A2RTX5 802 aaKnown RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 ENC1O14682 589 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 UFL1O94874 794 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 IDEP14735 1019 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 TXKP42681 527 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 LMAN1P49257 510 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 STK4Q13043 487 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 CASP8Q14790 479 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 CCDC96Q2M329 555 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 PAPD7Q5XG87 772 aaKnown RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 USP17L2Q6R6M4 530 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 ZSCAN29Q8IWY8 852 aaPredicted RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 NOA1Q8NC60 698 aaKnown RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 NEK11Q8NG66 645 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 TBC1D22AQ8WUA7 517 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 SECISBP2LQ93073 1101 aaKnown RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 CCDC102AQ96A19 550 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 PIGSQ96S52 555 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 TSG101Q99816 390 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 TTYH3Q9C0H2 523 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 VAT1LQ9HCJ6 419 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 MED4Q9NPJ6 270 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 VPS18Q9P253 973 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 BIN2Q9UBW5 565 aaPredicted RBP7.79□□□□□ -1.16
TDP1-213ENST00000555880 ADAM21Q9UKJ8 722 aa7.79□□□□□ -1.16
TDP1-213ENST00000555880 NHSQ6T4R5 1651 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 TAF1LQ8IZX4 1826 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 ABCB11O95342 1321 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 A0A0U1RQG5 324 aaPredicted RBP7.78□□□□□ -1.16
TDP1-213ENST00000555880 H3BQF6 201 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 TACC1O75410 805 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 ATP1A1P05023 1023 aaKnown RBP7.78□□□□□ -1.16
TDP1-213ENST00000555880 FCER1AP12319 257 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 ATP2B4P23634 1241 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 TNNT3P45378 269 aaPredicted RBP7.78□□□□□ -1.16
TDP1-213ENST00000555880 VAV2P52735 878 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 USP14P54578 494 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 ST5P78524 1137 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 LRRC63Q05C16 580 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 NFIXQ14938 502 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 VWA3BQ502W6 1294 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 ASPRV1Q53RT3 343 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 SLC27A3Q5K4L6 730 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 KRT79Q5XKE5 535 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 ZNF772Q68DY9 489 aaPredicted RBP7.78□□□□□ -1.16
TDP1-213ENST00000555880 LEKR1Q6ZMV7 388 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 UNC13DQ70J99 1090 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 TRIM58Q8NG06 486 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 FAM71BQ8TC56 605 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 FBXO41Q8TF61 875 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 LARP4BQ92615 738 aaKnown RBP7.78□□□□□ -1.16
TDP1-213ENST00000555880 CEP95Q96GE4 821 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 ALS2CR12Q96Q35 445 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 CPVLQ9H3G5 476 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 DEF6Q9H4E7 631 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 VIPAS39Q9H9C1 493 aa7.78□□□□□ -1.16
TDP1-213ENST00000555880 JADE2Q9NQC1 790 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms