RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 SPDYE3A6NKU9 549 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 SREBF1P36956 1147 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 FXR1P51114 621 aaKnown RBP eCLIP15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 UBXN1Q04323 297 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 TRAF1Q13077 416 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 TRIM14Q14142 442 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 Q4G0T1 1027 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 FAM83BQ5T0W9 1011 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 SYT10Q6XYQ8 523 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 TOGARAM2Q6ZUX3 1019 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 CDAN1Q8IWY9 1227 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 DDX12PQ92771 950 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 HPS3Q969F9 1004 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 SLC39A2Q9NP94 309 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 LGALS16A8MUM7 142 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 TBX3O15119 743 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 TAL1P17542 331 aaPredicted RBP15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 FECHP22830 423 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 CAP2P40123 477 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 ETF1P62495 437 aaKnown RBP15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 CIAPIN1Q6FI81 312 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 CENPPQ6IPU0 288 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 TRIM65Q6PJ69 517 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 MIGA2Q7L4E1 593 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 TEX2Q8IWB9 1127 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 MB21D1Q8N884 522 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 ETNPPLQ8TBG4 499 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 FER1L6Q2WGJ9 1857 aa15.66■□□□□ 0.1
RAB3IP-216ENST00000552199 GOLGA6L9A6NEM1 432 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 SMCHD1A6NHR9 2005 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 PIK3CDO00329 1044 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 WNT10BO00744 389 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 MAP3K10Q02779 954 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 EHHADHQ08426 723 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 PSMD2Q13200 908 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 PRR16Q569H4 304 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 DALRD3Q5D0E6 543 aaKnown RBP15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 FAM114A1Q8IWE2 563 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 ZNF507Q8TCN5 953 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 CHURC1Q8WUH1 139 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 UIMC1Q96RL1 719 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 SEMA6BQ9H3T3 888 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 VCPKMTQ9H867 229 aa15.65■□□□□ 0.1
RAB3IP-216ENST00000552199 A0A1W2PQC6 194 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 PLA2G6O60733 806 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 CIITAP33076 1130 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 SYCP1Q15431 976 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 NBPF9Q3BBW0 867 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 ZNF710Q8N1W2 664 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 GUF1Q8N442 669 aaKnown RBP15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 DNAJC19Q96DA6 116 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 MYOZ2Q9NPC6 264 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 KIAA1024Q9UPX6 916 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 PHLPP2Q6ZVD8 1323 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 SOWAHDA6NJG2 315 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 ZBTB7AO95365 584 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 CYP3A4P08684 503 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 IDEP14735 1019 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 HOXA13P31271 388 aaPredicted RBP15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 DNM2P50570 870 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 MTF1Q14872 753 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 RAD9BQ6WBX8 426 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 JDP2Q8WYK2 163 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 LENG9Q96B70 501 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 TUBGCP2Q9BSJ2 902 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 TAOK3Q9H2K8 898 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 RANBP17Q9H2T7 1088 aaKnown RBP15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 SH2D4AQ9H788 454 aa15.64■□□□□ 0.09
RAB3IP-216ENST00000552199 E9PMD0 336 aa15.63■□□□□ 0.09
RAB3IP-216ENST00000552199 FAM86B1E9PN63 330 aa15.63■□□□□ 0.09
RAB3IP-216ENST00000552199 RNF225M0QZC1 329 aaPredicted RBP15.63■□□□□ 0.09
RAB3IP-216ENST00000552199 RRP9O43818 475 aaKnown RBP15.63■□□□□ 0.09
RAB3IP-216ENST00000552199 FAM86B2P0C5J1 330 aa15.63■□□□□ 0.09
RAB3IP-216ENST00000552199 STAT3P40763 770 aa15.63■□□□□ 0.09
RAB3IP-216ENST00000552199 SPIRE1Q08AE8 756 aa15.63■□□□□ 0.09
RAB3IP-216ENST00000552199 CNOT6LQ96LI5 555 aaKnown RBP15.63■□□□□ 0.09
RAB3IP-216ENST00000552199 FAM20AQ96MK3 541 aa15.63■□□□□ 0.09
RAB3IP-216ENST00000552199 ABHD10Q9NUJ1 306 aa15.63■□□□□ 0.09
RAB3IP-216ENST00000552199 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.63■□□□□ 0.09
RAB3IP-216ENST00000552199 POTEB3A0JP26 581 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 POTECB2RU33 542 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 MED24O75448 989 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 PLA2G4BP0C869 781 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 TNIP1Q15025 636 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 POTEBQ6S5H4 581 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 FAM160B2Q86V87 743 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 KIFC2Q96AC6 838 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 L2HGDHQ9H9P8 463 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 BMP2KQ9NSY1 1161 aaPredicted RBP15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 DNAI1Q9UI46 699 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 BRCA1P38398 1863 aaKnown RBP15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 SHTN1A0MZ66 631 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 PES1O00541 588 aaKnown RBP15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 PRKCSHP14314 528 aaPredicted RBP15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 COASYQ13057 564 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 ZYXQ15942 572 aaKnown RBP15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 CCDC174Q6PII3 467 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 MTERF4Q7Z6M4 381 aaKnown RBP15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 TMTC1Q8IUR5 882 aa15.62■□□□□ 0.09
RAB3IP-216ENST00000552199 MAP7D2Q96T17 732 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms