RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	OR52Z1	P0C646	297 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	CYP3A7	P24462	503 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	PRPH	P41219	470 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	NUBP1	P53384	320 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	UBE2H	P62256	183 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	UBXN2A	P68543	259 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	PGM5	Q15124	567 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	PWP2	Q15269	919 aa	Known RBP	13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	NFKBIB	Q15653	356 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	CALCRL	Q16602	461 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	TMEM266	Q2M3C6	531 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	GPR142	Q7Z601	462 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	SLFN12	Q8IYM2	578 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	KRI1	Q8N9T8	703 aa	Known RBP	13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	RAB34	Q9BZG1	259 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	TBX3	O15119	743 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	CUTA	O60888	179 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	NR3C2	P08235	984 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	MYCL	P12524	364 aa	Predicted RBP	13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	ADORA2A	P29274	412 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	MARCKS	P29966	332 aa	Predicted RBP	13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	ALDH5A1	P51649	535 aa	Predicted RBP	13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	C1QTNF8	P60827	252 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	PDE4D	Q08499	809 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	KIF22	Q14807	665 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160		Q4G0T1	1027 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	CEP55	Q53EZ4	464 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	PRR16	Q569H4	304 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	NIPA1	Q7RTP0	329 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	NLRX1	Q86UT6	975 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	FAM133A	Q8N9E0	248 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	CFHR5	Q9BXR6	569 aa		13.16	□□□□□ -0.3
CNOT2-223	ENST00000550160	DNAJC25-GNG10	A0A024R161	153 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	ASB14	A6NK59	587 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	WNT7A	O00755	349 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	TNPO2	O14787	897 aa	Known RBP	13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	MBD3	O95983	291 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	PGK2	P07205	417 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	PTPRE	P23469	700 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	FCGRT	P55899	365 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	HTRA3	P83110	453 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	CNTN2	Q02246	1040 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	GRB14	Q14449	540 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	STXBP2	Q15833	593 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	GNPTAB	Q3T906	1256 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	DTHD1	Q6ZMT9	781 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	DPP9	Q86TI2	863 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	PLA2G4D	Q86XP0	818 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	SOCS4	Q8WXH5	440 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	CDHR1	Q96JP9	859 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	FAM20A	Q96MK3	541 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	MBOAT7	Q96N66	472 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	MXRA8	Q9BRK3	442 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	BEGAIN	Q9BUH8	593 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	LMBRD1	Q9NUN5	540 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	PCDHA7	Q9UN72	937 aa		13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160	SRPRB	Q9Y5M8	271 aa	Known RBP	13.15	□□□□□ -0.3
CNOT2-223	ENST00000550160		A0A1W2PQ27	194 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160		A0A1W2PQ64	194 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160		A0A1W2PQD8	194 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	FAM86B1	E9PN63	330 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	SLC37A4	O43826	429 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	TRPA1	O75762	1119 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	FAM86B2	P0C5J1	330 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	LONP1	P36776	959 aa	Known RBP	13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	MAP2K1	Q02750	393 aa	Predicted RBP	13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	ADAL	Q6DHV7	355 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	CCDC73	Q6ZRK6	1079 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	VSIG10L	Q86VR7	867 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	ZNF579	Q8NAF0	562 aa	Known RBP	13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	IL31RA	Q8NI17	732 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	GPRASP2	Q96D09	838 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	NUDT12	Q9BQG2	462 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	RNF186	Q9NXI6	227 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	SAGE1	Q9NXZ1	904 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	TCEAL9	Q9UHQ7	104 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	FBXO2	Q9UK22	296 aa	Predicted RBP	13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	DIS3	Q9Y2L1	958 aa	Known RBP	13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	UBIAD1	Q9Y5Z9	338 aa		13.14	□□□□□ -0.31
CNOT2-223	ENST00000550160	THSD7B	Q9C0I4	1608 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	VWA3A	A6NCI4	1184 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	MEIS1	O00470	390 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	MAFG	O15525	162 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	EIF3J	O75822	258 aa	Known RBP	13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	TBC1D8	O95759	1140 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	TXLNA	P40222	546 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	TXK	P42681	527 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	MAP2K5	Q13163	448 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	MTMR1	Q13613	665 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	C4orf32	Q8N8J7	132 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	AK8	Q96MA6	479 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	PURB	Q96QR8	312 aa	Known RBP	13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	TMEM60	Q9H2L4	133 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	KCNMB3	Q9NPA1	279 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	JADE2	Q9NQC1	790 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	FAM13B	Q9NYF5	915 aa		13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	DDX49	Q9Y6V7	483 aa	Known RBP	13.13	□□□□□ -0.31
CNOT2-223	ENST00000550160	MYH7B	A7E2Y1	1941 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms