RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 MKRN4PQ13434 485 aaPredicted RBP10.57□□□□□ -0.72
UBE2N-203ENST00000549490 CLUL1Q15846 466 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 CTC1Q2NKJ3 1217 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 TRIM71Q2Q1W2 868 aaKnown RBP10.57□□□□□ -0.72
UBE2N-203ENST00000549490 ZNF618Q5T7W0 954 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 TRIM67Q6ZTA4 783 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 MYOCDQ8IZQ8 938 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 CLEC4DQ8WXI8 215 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 WNT8BQ93098 351 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 PBXIP1Q96AQ6 731 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 PRRX2Q99811 253 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 RANBP17Q9H2T7 1088 aaKnown RBP10.57□□□□□ -0.72
UBE2N-203ENST00000549490 ALG13Q9NP73 1137 aaKnown RBP10.57□□□□□ -0.72
UBE2N-203ENST00000549490 FAM86C1Q9NVL1 165 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 HDAC6Q9UBN7 1215 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 GTF2IRD1Q9UHL9 959 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 TECTAO75443 2155 aa10.57□□□□□ -0.72
UBE2N-203ENST00000549490 PTPRZ1P23471 2315 aaPredicted RBP10.56□□□□□ -0.72
UBE2N-203ENST00000549490 C5orf42Q9H799 3197 aa10.56□□□□□ -0.72
UBE2N-203ENST00000549490 NCK2O43639 380 aa10.56□□□□□ -0.72
UBE2N-203ENST00000549490 AMHP03971 560 aa10.56□□□□□ -0.72
UBE2N-203ENST00000549490 MMP3P08254 477 aa10.56□□□□□ -0.72
UBE2N-203ENST00000549490 PTK7Q13308 1070 aa10.56□□□□□ -0.72
UBE2N-203ENST00000549490 PKN1Q16512 942 aa10.56□□□□□ -0.72
UBE2N-203ENST00000549490 TTBK2Q6IQ55 1244 aa10.56□□□□□ -0.72
UBE2N-203ENST00000549490 CCDC62Q6P9F0 684 aa10.56□□□□□ -0.72
UBE2N-203ENST00000549490 TMEM192Q8IY95 271 aa10.56□□□□□ -0.72
UBE2N-203ENST00000549490 DBF4BQ8NFT6 615 aa10.56□□□□□ -0.72
UBE2N-203ENST00000549490 STXBP3O00186 592 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 GPAA1O43292 621 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 RAB11FIP3O75154 756 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 APPP05067 770 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 SLC16A2P36021 539 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 RPS6P62753 249 aaKnown RBP10.55□□□□□ -0.72
UBE2N-203ENST00000549490 ZNF200P98182 395 aaPredicted RBP10.55□□□□□ -0.72
UBE2N-203ENST00000549490 ARHGAP1Q07960 439 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 HYAL1Q12794 435 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 RNF207Q6ZRF8 634 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 FBXO11Q86XK2 927 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 SUGP1Q8IWZ8 645 aaKnown RBP10.55□□□□□ -0.72
UBE2N-203ENST00000549490 C7orf31Q8N865 590 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 YME1L1Q96TA2 773 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 IL17RBQ9NRM6 502 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 STX8Q9UNK0 236 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 MTMR7Q9Y216 660 aa10.55□□□□□ -0.72
UBE2N-203ENST00000549490 PATL2C9JE40 543 aaKnown RBP10.54□□□□□ -0.72
UBE2N-203ENST00000549490 NMT2O60551 498 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 GH1P01241 217 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 GNAT2P19087 354 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 CASTP20810 708 aaKnown RBP10.54□□□□□ -0.72
UBE2N-203ENST00000549490 PSEN2P49810 448 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 ZXDAP98168 799 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 SMAD4Q13485 552 aaKnown RBP10.54□□□□□ -0.72
UBE2N-203ENST00000549490 LY6KQ17RY6 165 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 CCDC96Q2M329 555 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 SYDE2Q5VT97 1194 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 BTNL9Q6UXG8 535 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 CHST3Q7LGC8 479 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 SIRT2Q8IXJ6 389 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 IFNL3Q8IZI9 196 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 FBXL6Q8N531 539 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 DNERQ8NFT8 737 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 APPBP2Q92624 585 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 TOP1MTQ969P6 601 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 MPHOSPH6Q99547 160 aaKnown RBP10.54□□□□□ -0.72
UBE2N-203ENST00000549490 ALG1Q9BT22 464 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 EMSYQ7Z589 1322 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 SIP14410 1827 aa10.54□□□□□ -0.72
UBE2N-203ENST00000549490 LCTP09848 1927 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 M0R2C6 588 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 HAS3O00219 553 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 RNF113AO15541 343 aaKnown RBP10.53□□□□□ -0.72
UBE2N-203ENST00000549490 TBX10O75333 385 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 UPP2O95045 317 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 GTF2F1P35269 517 aaKnown RBP eCLIP10.53□□□□□ -0.723e-6■■□□□ 12.8
UBE2N-203ENST00000549490 HIC1Q14526 733 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 DGKDQ16760 1214 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 PLEKHG4Q58EX7 1191 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 PPP4R3BQ5MIZ7 849 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 KBTBD3Q8NAB2 608 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 DCAF4Q8WV16 495 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 ATOH1Q92858 354 aaPredicted RBP10.53□□□□□ -0.72
UBE2N-203ENST00000549490 INCENPQ9NQS7 918 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 CD207Q9UJ71 328 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 RIF1Q5UIP0 2472 aaKnown RBP10.53□□□□□ -0.72
UBE2N-203ENST00000549490 MYO7AQ13402 2215 aa10.53□□□□□ -0.72
UBE2N-203ENST00000549490 MYO15AQ9UKN7 3530 aa10.52□□□□□ -0.73
UBE2N-203ENST00000549490 RSPH10B2B2RC85 870 aa10.52□□□□□ -0.73
UBE2N-203ENST00000549490 B4DLN1 442 aa10.52□□□□□ -0.73
UBE2N-203ENST00000549490 GRM6O15303 877 aa10.52□□□□□ -0.73
UBE2N-203ENST00000549490 LINC01565O15544 149 aa10.52□□□□□ -0.73
UBE2N-203ENST00000549490 F2P00734 622 aa10.52□□□□□ -0.73
UBE2N-203ENST00000549490 SLC3A2P08195 630 aaKnown RBP10.52□□□□□ -0.73
UBE2N-203ENST00000549490 RSPH10BP0C881 870 aa10.52□□□□□ -0.73
UBE2N-203ENST00000549490 NOVP48745 357 aa10.52□□□□□ -0.73
UBE2N-203ENST00000549490 MRPL12P52815 198 aaKnown RBP10.52□□□□□ -0.73
UBE2N-203ENST00000549490 VCPP55072 806 aaKnown RBP10.52□□□□□ -0.73
UBE2N-203ENST00000549490 PPARAQ07869 468 aa10.52□□□□□ -0.73
UBE2N-203ENST00000549490 MFSD10Q14728 455 aa10.52□□□□□ -0.73
UBE2N-203ENST00000549490 KIAA0753Q2KHM9 967 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms