RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 RASSF7Q02833 373 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 PWP2Q15269 919 aaKnown RBP15.2■□□□□ 0.02
HDAC7-228ENST00000548938 KLHDC7AQ5VTJ3 777 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 HEATR3Q7Z4Q2 680 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 AMIGO3Q86WK7 504 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 CUEDC2Q9H467 287 aa15.2■□□□□ 0.02
HDAC7-228ENST00000548938 EP400Q96L91 3159 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 MYO1FO00160 1098 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 GNPATO15228 680 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 ZPR1O75312 459 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 HEXIM1O94992 359 aaKnown RBP15.19■□□□□ 0.02
HDAC7-228ENST00000548938 LSP1P33241 339 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 CFAP58Q5T655 872 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 B4GALNT4Q76KP1 1039 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 IQCKQ8N0W5 287 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 GPATCH11Q8N954 259 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 PRPF38AQ8NAV1 312 aaKnown RBP15.19■□□□□ 0.02
HDAC7-228ENST00000548938 IFT81Q8WYA0 676 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 C7orf25Q9BPX7 421 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 MAGEF1Q9HAY2 307 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 TCP11L1Q9NUJ3 509 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 MTMR7Q9Y216 660 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 KIAA0754O94854 1291 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 FNTAP49354 379 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 GUCY2FP51841 1108 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 GUCY2DQ02846 1103 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 SF3B2Q13435 895 aaKnown RBP15.19■□□□□ 0.02
HDAC7-228ENST00000548938 KDM7AQ6ZMT4 941 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 BICDL1Q6ZP65 573 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 PNMA1Q8ND90 353 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 BAP1Q92560 729 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 EPB41L5Q9HCM4 733 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 SRP68Q9UHB9 627 aaKnown RBP15.19■□□□□ 0.02
HDAC7-228ENST00000548938 MYH1P12882 1939 aa15.19■□□□□ 0.02
HDAC7-228ENST00000548938 PJA2O43164 708 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 PRPHP41219 470 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 NAP1L1P55209 391 aaKnown RBP15.18■□□□□ 0.02
HDAC7-228ENST00000548938 NAA35Q5VZE5 725 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 TBC1D9BQ66K14 1250 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 IFT20Q8IY31 132 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 OTUD6BQ8N6M0 293 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 PIK3R5Q8WYR1 880 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 IQCDQ96DY2 449 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 NOX5Q96PH1 765 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 QTRT2Q9H974 415 aaKnown RBP15.18■□□□□ 0.02
HDAC7-228ENST00000548938 GDF3Q9NR23 364 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 ATXN2Q99700 1313 aaKnown RBP15.18■□□□□ 0.02
HDAC7-228ENST00000548938 MEFVO15553 781 aaPredicted RBP15.18■□□□□ 0.02
HDAC7-228ENST00000548938 OR52Z1P0C646 297 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 ERFEQ4G0M1 354 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 CFAP221Q4G0U5 840 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 CENPPQ6IPU0 288 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 NARFQ9UHQ1 456 aa15.18■□□□□ 0.02
HDAC7-228ENST00000548938 LAD1O00515 517 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 CYTH3O43739 400 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 NR1D1P20393 614 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 PAK2Q13177 524 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 MAN2A1Q16706 1144 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 ASTE1Q2TB18 679 aaPredicted RBP15.17■□□□□ 0.02
HDAC7-228ENST00000548938 GLE1Q53GS7 698 aaKnown RBP15.17■□□□□ 0.02
HDAC7-228ENST00000548938 CNNM4Q6P4Q7 775 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 CCDC91Q7Z6B0 441 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 CCDC155Q8N6L0 562 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 NSUN4Q96CB9 384 aaKnown RBP15.17■□□□□ 0.02
HDAC7-228ENST00000548938 IL17RBQ9NRM6 502 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 CASZ1Q86V15 1759 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 A6NNZ2 444 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 H0YHG0 523 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 STXBP3O00186 592 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 MECOMQ03112 1051 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 TRADDQ15628 312 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 LETM2Q2VYF4 491 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 TUBB8Q3ZCM7 444 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 TDRD12Q587J7 1177 aaKnown RBP15.17■□□□□ 0.02
HDAC7-228ENST00000548938 C3orf67Q6ZVT6 689 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 DAGLBQ8NCG7 672 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 CRNKL1Q9BZJ0 848 aaKnown RBP15.17■□□□□ 0.02
HDAC7-228ENST00000548938 EPN3Q9H201 632 aa15.17■□□□□ 0.02
HDAC7-228ENST00000548938 LAMB1P07942 1786 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 FTCDO95954 541 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 PPP1R2P41236 205 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 TECP42680 631 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 SEC24CP53992 1094 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 TFAP4Q01664 338 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 PDXDC1Q6P996 788 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 CASKIN2Q8WXE0 1202 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 AK8Q96MA6 479 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 MMTAG2Q9BU76 263 aaKnown RBP15.16■□□□□ 0.02
HDAC7-228ENST00000548938 MAD2L2Q9UI95 211 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 RTCBQ9Y3I0 505 aaKnown RBP15.16■□□□□ 0.02
HDAC7-228ENST00000548938 RGL2O15211 777 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 CCNT1O60563 726 aaKnown RBP15.16■□□□□ 0.02
HDAC7-228ENST00000548938 FSBPO95073 299 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 USP8P40818 1118 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 PTGISQ16647 500 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 HGSNATQ68CP4 663 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 CCDC84Q86UT8 332 aaPredicted RBP15.16■□□□□ 0.02
HDAC7-228ENST00000548938 ZNF473Q8WTR7 871 aaKnown RBP15.16■□□□□ 0.02
HDAC7-228ENST00000548938 KRT12Q99456 494 aa15.16■□□□□ 0.02
HDAC7-228ENST00000548938 BARHL2Q9NY43 387 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms