RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 CPT1AP50416 773 aa13.6□□□□□ -0.23
RAB5C-204ENST00000547517 STK3Q13188 491 aa13.6□□□□□ -0.23
RAB5C-204ENST00000547517 LY6KQ17RY6 165 aa13.6□□□□□ -0.23
RAB5C-204ENST00000547517 C8orf34Q49A92 452 aa13.6□□□□□ -0.23
RAB5C-204ENST00000547517 TYW1BQ6NUM6 668 aa13.6□□□□□ -0.23
RAB5C-204ENST00000547517 PPP1R18Q6NYC8 613 aa13.6□□□□□ -0.23
RAB5C-204ENST00000547517 PHKBQ93100 1093 aa13.6□□□□□ -0.23
RAB5C-204ENST00000547517 PRDM5Q9NQX1 630 aaPredicted RBP13.6□□□□□ -0.23
RAB5C-204ENST00000547517 KIAA1217Q5T5P2 1943 aa13.6□□□□□ -0.23
RAB5C-204ENST00000547517 hCG_1984214I3L0E3 225 aa13.59□□□□□ -0.23
RAB5C-204ENST00000547517 MYL3P08590 195 aa13.59□□□□□ -0.23
RAB5C-204ENST00000547517 SCG2P13521 617 aa13.59□□□□□ -0.23
RAB5C-204ENST00000547517 ADCY7P51828 1080 aa13.59□□□□□ -0.23
RAB5C-204ENST00000547517 EVCP57679 992 aa13.59□□□□□ -0.23
RAB5C-204ENST00000547517 AKAP17AQ02040 695 aaKnown RBP13.59□□□□□ -0.23
RAB5C-204ENST00000547517 PFKFB3Q16875 520 aaPredicted RBP13.59□□□□□ -0.23
RAB5C-204ENST00000547517 C1orf53Q5VUE5 145 aa13.59□□□□□ -0.23
RAB5C-204ENST00000547517 CCDC62Q6P9F0 684 aa13.59□□□□□ -0.23
RAB5C-204ENST00000547517 VSIG10LQ86VR7 867 aa13.59□□□□□ -0.23
RAB5C-204ENST00000547517 ZNF713Q8N859 430 aaPredicted RBP13.59□□□□□ -0.23
RAB5C-204ENST00000547517 SLC26A6Q9BXS9 759 aa13.59□□□□□ -0.23
RAB5C-204ENST00000547517 BARHL2Q9NY43 387 aa13.59□□□□□ -0.23
RAB5C-204ENST00000547517 PRKAG2Q9UGJ0 569 aa13.59□□□□□ -0.23
RAB5C-204ENST00000547517 ELP1O95163 1332 aa13.59□□□□□ -0.23
RAB5C-204ENST00000547517 CEP290O15078 2479 aa13.58□□□□□ -0.23
RAB5C-204ENST00000547517 A0A0U1RQG5 324 aaPredicted RBP13.58□□□□□ -0.24
RAB5C-204ENST00000547517 SPDYE3A6NKU9 549 aa13.58□□□□□ -0.24
RAB5C-204ENST00000547517 SORBS3O60504 671 aa13.58□□□□□ -0.24
RAB5C-204ENST00000547517 RGS20O76081 388 aa13.58□□□□□ -0.24
RAB5C-204ENST00000547517 GH1P01241 217 aa13.58□□□□□ -0.24
RAB5C-204ENST00000547517 PSMC6P62333 389 aa13.58□□□□□ -0.24
RAB5C-204ENST00000547517 TLE2Q04725 743 aa13.58□□□□□ -0.24
RAB5C-204ENST00000547517 ARHGAP1Q07960 439 aa13.58□□□□□ -0.24
RAB5C-204ENST00000547517 NTRK3Q16288 839 aa13.58□□□□□ -0.24
RAB5C-204ENST00000547517 BRDTQ58F21 947 aaPredicted RBP13.58□□□□□ -0.24
RAB5C-204ENST00000547517 PDLIM7Q9NR12 457 aa13.58□□□□□ -0.24
RAB5C-204ENST00000547517 RBM27Q9P2N5 1060 aaKnown RBP13.58□□□□□ -0.24
RAB5C-204ENST00000547517 DDX41Q9UJV9 622 aaKnown RBP13.58□□□□□ -0.24
RAB5C-204ENST00000547517 COLQQ9Y215 455 aaPredicted RBP13.58□□□□□ -0.24
RAB5C-204ENST00000547517 CPLX1O14810 134 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 PRPF3O43395 683 aaKnown RBP13.57□□□□□ -0.24
RAB5C-204ENST00000547517 CABYRO75952 493 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 CLTBP09497 229 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 IFNAR1P17181 557 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 MAGEA10P43363 369 aaPredicted RBP13.57□□□□□ -0.24
RAB5C-204ENST00000547517 AK2P54819 239 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 MRPS9P82933 396 aaKnown RBP13.57□□□□□ -0.24
RAB5C-204ENST00000547517 PURAQ00577 322 aaKnown RBP13.57□□□□□ -0.24
RAB5C-204ENST00000547517 GNPTABQ3T906 1256 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 PCNX4Q63HM2 1172 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 AFG1LQ8WV93 481 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 ZNF274Q96GC6 653 aaPredicted RBP13.57□□□□□ -0.24
RAB5C-204ENST00000547517 PGBD1Q96JS3 809 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 RNF26Q9BY78 433 aaPredicted RBP13.57□□□□□ -0.24
RAB5C-204ENST00000547517 RIC8AQ9NPQ8 531 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 POLR3EQ9NVU0 708 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 RTEL1Q9NZ71 1219 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 PCDHA6Q9UN73 950 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 PCDHA8Q9Y5H6 950 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 MROH7Q68CQ1 1323 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 LTBP2Q14767 1821 aa13.57□□□□□ -0.24
RAB5C-204ENST00000547517 SMCO2A6NFE2 343 aa13.56□□□□□ -0.24
RAB5C-204ENST00000547517 ARVCFO00192 962 aa13.56□□□□□ -0.24
RAB5C-204ENST00000547517 STAM2O75886 525 aa13.56□□□□□ -0.24
RAB5C-204ENST00000547517 MMP3P08254 477 aa13.56□□□□□ -0.24
RAB5C-204ENST00000547517 UBA1P22314 1058 aaKnown RBP13.56□□□□□ -0.24
RAB5C-204ENST00000547517 MDM2Q00987 491 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-204ENST00000547517 ITGA7Q13683 1181 aa13.56□□□□□ -0.24
RAB5C-204ENST00000547517 PKN1Q16512 942 aa13.56□□□□□ -0.24
RAB5C-204ENST00000547517 ANKRD33Q7Z3H0 272 aa13.56□□□□□ -0.24
RAB5C-204ENST00000547517 SH3RF1Q7Z6J0 888 aa13.56□□□□□ -0.24
RAB5C-204ENST00000547517 DHX37Q8IY37 1157 aaKnown RBP13.56□□□□□ -0.24
RAB5C-204ENST00000547517 IL17RAQ96F46 866 aa13.56□□□□□ -0.24
RAB5C-204ENST00000547517 INPP4AQ96PE3 977 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-204ENST00000547517 SLKQ9H2G2 1235 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-204ENST00000547517 EHMT1Q9H9B1 1298 aa13.56□□□□□ -0.24
RAB5C-204ENST00000547517 TMEM260Q9NX78 707 aa13.56□□□□□ -0.24
RAB5C-204ENST00000547517 TPCN1Q9ULQ1 816 aa13.56□□□□□ -0.24
RAB5C-204ENST00000547517 A6NJR5 290 aa13.55□□□□□ -0.24
RAB5C-204ENST00000547517 DCDC2CA8MYV0 355 aa13.55□□□□□ -0.24
RAB5C-204ENST00000547517 FIBPO43427 364 aa13.55□□□□□ -0.24
RAB5C-204ENST00000547517 GGPS1O95749 300 aa13.55□□□□□ -0.24
RAB5C-204ENST00000547517 SCRN1Q12765 414 aa13.55□□□□□ -0.24
RAB5C-204ENST00000547517 ANKRD1Q15327 319 aa13.55□□□□□ -0.24
RAB5C-204ENST00000547517 KCNV1Q6PIU1 500 aa13.55□□□□□ -0.24
RAB5C-204ENST00000547517 CPLX2Q6PUV4 134 aaKnown RBP13.55□□□□□ -0.24
RAB5C-204ENST00000547517 TRIM22Q8IYM9 498 aa13.55□□□□□ -0.24
RAB5C-204ENST00000547517 CCDC12Q8WUD4 166 aaPredicted RBP13.55□□□□□ -0.24
RAB5C-204ENST00000547517 EMID1Q96A84 441 aaPredicted RBP13.55□□□□□ -0.24
RAB5C-204ENST00000547517 GDF15Q99988 308 aa13.55□□□□□ -0.24
RAB5C-204ENST00000547517 LBHD1Q9BQE6 289 aaPredicted RBP13.55□□□□□ -0.24
RAB5C-204ENST00000547517 MTG1Q9BT17 334 aaPredicted RBP13.55□□□□□ -0.24
RAB5C-204ENST00000547517 ANO3Q9BYT9 981 aa13.55□□□□□ -0.24
RAB5C-204ENST00000547517 VPS54Q9P1Q0 977 aa13.55□□□□□ -0.24
RAB5C-204ENST00000547517 GRIN2DO15399 1336 aa13.55□□□□□ -0.24
RAB5C-204ENST00000547517 ESYT2A0FGR8 921 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 TRIM43BA6NCK2 446 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 CDK7P50613 346 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 NEK4P51957 841 aa13.54□□□□□ -0.24
RAB5C-204ENST00000547517 CHMP4BP1P59074 171 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms