RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 ADGRF4Q8IZF3 695 aa13.91□□□□□ -0.18
HDAC7-226ENST00000547259 NSUN7Q8NE18 718 aaKnown RBP13.91□□□□□ -0.18
HDAC7-226ENST00000547259 PIBF1Q8WXW3 757 aa13.91□□□□□ -0.18
HDAC7-226ENST00000547259 PHKBQ93100 1093 aa13.91□□□□□ -0.18
HDAC7-226ENST00000547259 TIFAQ96CG3 184 aa13.91□□□□□ -0.18
HDAC7-226ENST00000547259 RRP36Q96EU6 259 aaKnown RBP13.91□□□□□ -0.18
HDAC7-226ENST00000547259 LLPHQ9BRT6 129 aaKnown RBP13.91□□□□□ -0.18
HDAC7-226ENST00000547259 AP5M1Q9H0R1 490 aa13.91□□□□□ -0.18
HDAC7-226ENST00000547259 JMJD4Q9H9V9 463 aa13.91□□□□□ -0.18
HDAC7-226ENST00000547259 SEC63Q9UGP8 760 aaKnown RBP13.91□□□□□ -0.18
HDAC7-226ENST00000547259 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.91□□□□□ -0.18
HDAC7-226ENST00000547259 CYTH3O43739 400 aa13.9□□□□□ -0.18
HDAC7-226ENST00000547259 JAK2O60674 1132 aa13.9□□□□□ -0.18
HDAC7-226ENST00000547259 CTDNEP1O95476 244 aa13.9□□□□□ -0.18
HDAC7-226ENST00000547259 EPHB4P54760 987 aa13.9□□□□□ -0.18
HDAC7-226ENST00000547259 TNFAIP2Q03169 654 aa13.9□□□□□ -0.18
HDAC7-226ENST00000547259 CDC37Q16543 378 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-226ENST00000547259 SLC35G1Q2M3R5 365 aa13.9□□□□□ -0.18
HDAC7-226ENST00000547259 LENG1Q96BZ8 264 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-226ENST00000547259 PIGSQ96S52 555 aa13.9□□□□□ -0.18
HDAC7-226ENST00000547259 GAS2L1Q99501 681 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-226ENST00000547259 RNF26Q9BY78 433 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-226ENST00000547259 ZNF576Q9H609 170 aa13.9□□□□□ -0.18
HDAC7-226ENST00000547259 RIOX1Q9H6W3 641 aa13.9□□□□□ -0.18
HDAC7-226ENST00000547259 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
HDAC7-226ENST00000547259 DAXXQ9UER7 740 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-226ENST00000547259 PNMA2Q9UL42 364 aa13.9□□□□□ -0.18
HDAC7-226ENST00000547259 Q9Y3F1 56 aa13.9□□□□□ -0.18
HDAC7-226ENST00000547259 STK36Q9NRP7 1315 aa13.9□□□□□ -0.19
HDAC7-226ENST00000547259 LOC102724159A0A0B4J2E5 919 aa13.89□□□□□ -0.19
HDAC7-226ENST00000547259 hCG_1642624A0A1W2PR95 340 aa13.89□□□□□ -0.19
HDAC7-226ENST00000547259 PRPF3O43395 683 aaKnown RBP13.89□□□□□ -0.19
HDAC7-226ENST00000547259 DTNBO60941 627 aa13.89□□□□□ -0.19
HDAC7-226ENST00000547259 SNAP25P60880 206 aa13.89□□□□□ -0.19
HDAC7-226ENST00000547259 FUT2Q10981 343 aa13.89□□□□□ -0.19
HDAC7-226ENST00000547259 PWP2Q15269 919 aaKnown RBP13.89□□□□□ -0.19
HDAC7-226ENST00000547259 RAB30Q15771 203 aa13.89□□□□□ -0.19
HDAC7-226ENST00000547259 IQSEC1Q6DN90 963 aa13.89□□□□□ -0.19
HDAC7-226ENST00000547259 FAM133AQ8N9E0 248 aa13.89□□□□□ -0.19
HDAC7-226ENST00000547259 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.89□□□□□ -0.191e-7■■■□□ 18.3
HDAC7-226ENST00000547259 RANBP17Q9H2T7 1088 aaKnown RBP13.89□□□□□ -0.19
HDAC7-226ENST00000547259 HOMER2Q9NSB8 354 aa13.89□□□□□ -0.19
HDAC7-226ENST00000547259 MSRAQ9UJ68 235 aa13.89□□□□□ -0.19
HDAC7-226ENST00000547259 SMC3Q9UQE7 1217 aa13.89□□□□□ -0.19
HDAC7-226ENST00000547259 ZBTB5O15062 677 aa13.88□□□□□ -0.19
HDAC7-226ENST00000547259 DEXIO95424 95 aa13.88□□□□□ -0.19
HDAC7-226ENST00000547259 HMGN5P82970 282 aaKnown RBP13.88□□□□□ -0.19
HDAC7-226ENST00000547259 QRICH1Q2TAL8 776 aa13.88□□□□□ -0.19
HDAC7-226ENST00000547259 TMEM240Q5SV17 173 aa13.88□□□□□ -0.19
HDAC7-226ENST00000547259 FAM126BQ8IXS8 530 aa13.88□□□□□ -0.19
HDAC7-226ENST00000547259 RPUSD2Q8IZ73 545 aaKnown RBP13.88□□□□□ -0.19
HDAC7-226ENST00000547259 FAM184AQ8NB25 1140 aa13.88□□□□□ -0.19
HDAC7-226ENST00000547259 SPRYD3Q8NCJ5 442 aa13.88□□□□□ -0.19
HDAC7-226ENST00000547259 SMARCC2Q8TAQ2 1214 aa13.88□□□□□ -0.19
HDAC7-226ENST00000547259 INTS4Q96HW7 963 aaKnown RBP13.88□□□□□ -0.19
HDAC7-226ENST00000547259 TRERF1Q96PN7 1200 aa13.88□□□□□ -0.19
HDAC7-226ENST00000547259 IL23AQ9NPF7 189 aa13.88□□□□□ -0.19
HDAC7-226ENST00000547259 A1CFQ9NQ94 594 aaKnown RBP13.88□□□□□ -0.19
HDAC7-226ENST00000547259 RNF146Q9NTX7 359 aa13.88□□□□□ -0.19
HDAC7-226ENST00000547259 ORC3Q9UBD5 711 aaPredicted RBP13.88□□□□□ -0.19
HDAC7-226ENST00000547259 ADD3Q9UEY8 706 aaKnown RBP13.88□□□□□ -0.19
HDAC7-226ENST00000547259 V9GY48 417 aaPredicted RBP13.88□□□□□ -0.19
HDAC7-226ENST00000547259 PNMA6FA0A0J9YX94 578 aa13.87□□□□□ -0.19
HDAC7-226ENST00000547259 MYADML2A6NDP7 307 aa13.87□□□□□ -0.19
HDAC7-226ENST00000547259 CSF2RAP15509 400 aa13.87□□□□□ -0.19
HDAC7-226ENST00000547259 GJB2P29033 226 aa13.87□□□□□ -0.19
HDAC7-226ENST00000547259 GRIN2CQ14957 1233 aa13.87□□□□□ -0.19
HDAC7-226ENST00000547259 FSCN1Q16658 493 aaKnown RBP13.87□□□□□ -0.19
HDAC7-226ENST00000547259 TJAP1Q5JTD0 557 aa13.87□□□□□ -0.19
HDAC7-226ENST00000547259 RASIP1Q5U651 963 aa13.87□□□□□ -0.19
HDAC7-226ENST00000547259 WASF1Q92558 559 aa13.87□□□□□ -0.19
HDAC7-226ENST00000547259 MTMR8Q96EF0 704 aa13.87□□□□□ -0.19
HDAC7-226ENST00000547259 MPHOSPH6Q99547 160 aaKnown RBP13.87□□□□□ -0.19
HDAC7-226ENST00000547259 KATNBL1Q9H079 304 aa13.87□□□□□ -0.19
HDAC7-226ENST00000547259 VTA1Q9NP79 307 aa13.87□□□□□ -0.19
HDAC7-226ENST00000547259 KIF3AQ9Y496 699 aa13.87□□□□□ -0.19
HDAC7-226ENST00000547259 CD4P01730 458 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 FGBP02675 491 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 SUPT20HL2P0C7V6 817 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 ALAS1P13196 640 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 SCG2P13521 617 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 CNTN2Q02246 1040 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 ITGA7Q13683 1181 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 PFKFB3Q16875 520 aaPredicted RBP13.86□□□□□ -0.19
HDAC7-226ENST00000547259 USH1GQ495M9 461 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 BRDTQ58F21 947 aaPredicted RBP13.86□□□□□ -0.19
HDAC7-226ENST00000547259 ZNF365Q70YC5 407 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 HEATR3Q7Z4Q2 680 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 TLK2Q86UE8 772 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 FBXO11Q86XK2 927 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 SLC43A3Q8NBI5 491 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 ATXN2LQ8WWM7 1075 aaKnown RBP13.86□□□□□ -0.19
HDAC7-226ENST00000547259 HERVK_113Q902F9 699 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 GPKOWQ92917 476 aaPredicted RBP eCLIP13.86□□□□□ -0.19
HDAC7-226ENST00000547259 FGD4Q96M96 766 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 AMNQ9BXJ7 453 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 HIPK3Q9H422 1215 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 CCPG1Q9ULG6 757 aa13.86□□□□□ -0.19
HDAC7-226ENST00000547259 GNEQ9Y223 722 aaKnown RBP13.86□□□□□ -0.19
HDAC7-226ENST00000547259 B4DLN1 442 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms