RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SEC23AQ15436 765 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 CDC37Q16543 378 aaPredicted RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 TXNRD1Q16881 649 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 FAM182BQ5T319 152 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 DAGLBQ8NCG7 672 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 FLAD1Q8NFF5 587 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 ATRIPQ8WXE1 791 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 KIFC2Q96AC6 838 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 METTL14Q9HCE5 456 aaKnown RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 ARMCX3Q9UH62 379 aaPredicted RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 RABGAP1Q9Y3P9 1069 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 CEP83Q9Y592 693 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 ADAMTSL3P82987 1691 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 CEP104O60308 925 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 GAS7O60861 476 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 AFPP02771 609 aaKnown RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 PLA2G4BP0C869 781 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 DESP17661 470 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 EIF4A3P38919 411 aaKnown RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 PPFIA1Q13136 1202 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 NAA25Q14CX7 972 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 NCAPHQ15003 741 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 UBL4BQ8N7F7 174 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 KIFAP3Q92845 792 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 WDR24Q96S15 920 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 DHX36Q9H2U1 1008 aaKnown RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 KCND1Q9NSA2 647 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 ADD3Q9UEY8 706 aaKnown RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 GAP43P17677 238 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 KIF11P52732 1056 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 MTF1Q14872 753 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 CCDC6Q16204 474 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 SYDE2Q5VT97 1194 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 RASGRP2Q7LDG7 609 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 PEX26Q7Z412 305 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 GOLGA5Q8TBA6 731 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 U2AF1L4Q8WU68 220 aaKnown RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 EEF2KMTQ96G04 330 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 TEKT3Q9BXF9 490 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 ABCB6Q9NP58 842 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 TRPC5Q9UL62 973 aaPredicted RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 MRPL11Q9Y3B7 192 aaKnown RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 BZW2Q9Y6E2 419 aaKnown RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 CASZ1Q86V15 1759 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 PVALEFA0A1B0GWK0 134 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 ZBTB5O15062 677 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 TADA3O75528 432 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 BCRP11274 1271 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 NPR1P16066 1061 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 KLRK1P26718 216 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 INPP5BP32019 993 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 SMTNP53814 917 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 CACNB1Q02641 598 aaPredicted RBP6.35□□□□□ -1.39
VPS50-220ENST00000544910 VPS72Q15906 364 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 PPP4R3CPQ6ZMV5 832 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 C16orf86Q6ZW13 317 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 DAAM2Q86T65 1068 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 KIAA0825Q8IV33 1275 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 FNBP4Q8N3X1 1017 aaPredicted RBP6.35□□□□□ -1.39
VPS50-220ENST00000544910 CPVLQ9H3G5 476 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 KANSL2Q9H9L4 492 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 CAPN11Q9UMQ6 739 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 FLT1P17948 1338 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 GSTTP1A0A1W2PQM5 241 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 EXOC3O60645 756 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 MTMR3Q13615 1198 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 ZYXQ15942 572 aaKnown RBP6.35□□□□□ -1.39
VPS50-220ENST00000544910 NT5DC1Q5TFE4 455 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 MIER3Q7Z3K6 550 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 ADSSL1Q8N142 457 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 PROM2Q8N271 834 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 NLGN1Q8N2Q7 840 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 NEDD1Q8NHV4 660 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 FBF1Q8TES7 1133 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 CHURC1Q8WUH1 139 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 LRRC45Q96CN5 670 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 MTRF1LQ9UGC7 380 aaKnown RBP6.35□□□□□ -1.39
VPS50-220ENST00000544910 MTUS1Q9ULD2 1270 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 JRKLQ9Y4A0 524 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 ALS2Q96Q42 1657 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 POTEMA6NI47 508 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 NR2F2P24468 414 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 SH3BGRP55822 239 aaPredicted RBP6.35□□□□□ -1.39
VPS50-220ENST00000544910 AP3B2Q13367 1082 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 TERF2Q15554 542 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 ZSCAN26Q16670 478 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 USP49Q70CQ1 688 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 REXO1L1PQ8IX06 675 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 BANK1Q8NDB2 785 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 GDAP1L1Q96MZ0 367 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 C7orf25Q9BPX7 421 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 ANO3Q9BYT9 981 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 CCSER1Q9C0I3 900 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 EFCC1Q9HA90 598 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 PCDHB13Q9Y5F0 798 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 COL14A1Q05707 1796 aaKnown RBP6.35□□□□□ -1.39
VPS50-220ENST00000544910 KCNK3O14649 394 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 RHOBTB3O94955 611 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 STAT1P42224 750 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 FKBP3Q00688 224 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms