RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 KRT37O76014 449 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 PIK3CAP42336 1068 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 HIBCHQ6NVY1 386 aaPredicted RBP20.93■□□□□ 0.94
HDAC4-215ENST00000543185 CENPUQ71F23 418 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 GPT2Q8TD30 523 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 CARMIL3Q8ND23 1372 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 PPARGP37231 505 aaPredicted RBP20.93■□□□□ 0.94
HDAC4-215ENST00000543185 TMED2Q15363 201 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 TEX9Q8N6V9 391 aa20.93■□□□□ 0.94
HDAC4-215ENST00000543185 GPATCH8Q9UKJ3 1502 aaKnown RBP20.92■□□□□ 0.94
HDAC4-215ENST00000543185 MMEP08473 750 aa20.92■□□□□ 0.94
HDAC4-215ENST00000543185 CNOT6LQ96LI5 555 aaKnown RBP20.92■□□□□ 0.94
HDAC4-215ENST00000543185 GNPTABQ3T906 1256 aa20.92■□□□□ 0.94
HDAC4-215ENST00000543185 EXOC8Q8IYI6 725 aa20.92■□□□□ 0.94
HDAC4-215ENST00000543185 ARHGEF10O15013 1369 aa20.92■□□□□ 0.94
HDAC4-215ENST00000543185 MT-ND3P03897 115 aa20.92■□□□□ 0.94
HDAC4-215ENST00000543185 ANO5Q75V66 913 aa20.92■□□□□ 0.94
HDAC4-215ENST00000543185 SLC13A4Q9UKG4 626 aa20.92■□□□□ 0.94
HDAC4-215ENST00000543185 TLK1Q9UKI8 766 aa20.92■□□□□ 0.94
HDAC4-215ENST00000543185 UHRF1BP1LA0JNW5 1464 aa20.92■□□□□ 0.94
HDAC4-215ENST00000543185 NVLO15381 856 aaKnown RBP20.92■□□□□ 0.94
HDAC4-215ENST00000543185 CYP2J2P51589 502 aa20.92■□□□□ 0.94
HDAC4-215ENST00000543185 MYL7Q01449 175 aa20.92■□□□□ 0.94
HDAC4-215ENST00000543185 LRMPQ12912 555 aa20.92■□□□□ 0.94
HDAC4-215ENST00000543185 CDC37Q16543 378 aaPredicted RBP20.92■□□□□ 0.94
HDAC4-215ENST00000543185 FOXP2O15409 715 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 DONSONQ9NYP3 566 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 PTPREP23469 700 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 LIG4P49917 911 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 NLRX1Q86UT6 975 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 PDIK1LQ8N165 341 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 DEPTORQ8TB45 409 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 ZSCAN10Q96SZ4 725 aaPredicted RBP20.91■□□□□ 0.94
HDAC4-215ENST00000543185 BLZF1Q9H2G9 400 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 DDX25Q9UHL0 483 aaKnown RBP20.91■□□□□ 0.94
HDAC4-215ENST00000543185 SMYD2Q9NRG4 433 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 CASP14P31944 242 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 ADAM9Q13443 819 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 PCDHA12Q9UN75 941 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 SP4Q02446 784 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 SPTLC3Q9NUV7 552 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 H3BRJ5 948 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 K7ENM7 598 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 TRIM59Q8IWR1 403 aa20.91■□□□□ 0.94
HDAC4-215ENST00000543185 MED7O43513 233 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 LPIN2Q92539 896 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 SUN2Q9UH99 717 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 F8W031 263 aaPredicted RBP20.9■□□□□ 0.94
HDAC4-215ENST00000543185 TTBK2Q6IQ55 1244 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 XAGE2Q96GT9 111 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 NOD1Q9Y239 953 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 STAT2P52630 851 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 MORF4L2Q15014 288 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 CAPN11Q9UMQ6 739 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 MYH8P13535 1937 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 KDRP35968 1356 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 hCG_1984214I3L0E3 225 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 FOXO3O43524 673 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 ATP5JP18859 108 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 DYMQ7RTS9 669 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 SLC35F6Q8N357 371 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 ZNF713Q8N859 430 aaPredicted RBP20.9■□□□□ 0.94
HDAC4-215ENST00000543185 NDUFA8P51970 172 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 CACTINQ8WUQ7 758 aaKnown RBP20.9■□□□□ 0.94
HDAC4-215ENST00000543185 KIF2CQ99661 725 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 SNX5Q9Y5X3 404 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 SCG2P13521 617 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 POLR2FP61218 127 aaKnown RBP20.9■□□□□ 0.94
HDAC4-215ENST00000543185 EIF4A2Q14240 407 aaKnown RBP20.9■□□□□ 0.94
HDAC4-215ENST00000543185 SKA2Q8WVK7 121 aaPredicted RBP20.9■□□□□ 0.94
HDAC4-215ENST00000543185 ESRRBO95718 433 aa20.9■□□□□ 0.94
HDAC4-215ENST00000543185 TPH2Q8IWU9 490 aa20.89■□□□□ 0.94
HDAC4-215ENST00000543185 ZBBXA8MT70 800 aa20.89■□□□□ 0.94
HDAC4-215ENST00000543185 KDM1AO60341 852 aa20.89■□□□□ 0.94
HDAC4-215ENST00000543185 TAC1P20366 129 aa20.89■□□□□ 0.94
HDAC4-215ENST00000543185 ALCAMQ13740 583 aa20.89■□□□□ 0.94
HDAC4-215ENST00000543185 GCNT4Q9P109 453 aa20.89■□□□□ 0.94
HDAC4-215ENST00000543185 PAMP19021 973 aa20.89■□□□□ 0.93
HDAC4-215ENST00000543185 TRMT10CQ7L0Y3 403 aaKnown RBP20.89■□□□□ 0.93
HDAC4-215ENST00000543185 HNRNPRO43390 633 aaKnown RBP20.89■□□□□ 0.93
HDAC4-215ENST00000543185 NT5C2P49902 561 aa20.89■□□□□ 0.93
HDAC4-215ENST00000543185 TCOF1Q13428 1488 aaKnown RBP20.89■□□□□ 0.93
HDAC4-215ENST00000543185 MAN2A1Q16706 1144 aa20.89■□□□□ 0.93
HDAC4-215ENST00000543185 SPATA5Q8NB90 893 aa20.89■□□□□ 0.93
HDAC4-215ENST00000543185 SUCLA2Q9P2R7 463 aaPredicted RBP20.89■□□□□ 0.93
HDAC4-215ENST00000543185 PCDHA7Q9UN72 937 aa20.89■□□□□ 0.93
HDAC4-215ENST00000543185 RAPGEF3O95398 923 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 HNRNPCP07910 306 aaKnown RBP eCLIP20.88■□□□□ 0.936e-11■■□□□ 13.6
HDAC4-215ENST00000543185 SYT2Q8N9I0 419 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-215ENST00000543185 PITPNM3Q9BZ71 974 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 ZSWIM6Q9HCJ5 1215 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 APOBEC2Q9Y235 224 aaKnown RBP20.88■□□□□ 0.93
HDAC4-215ENST00000543185 IL1RL1Q01638 556 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 WDR75Q8IWA0 830 aaKnown RBP20.88■□□□□ 0.93
HDAC4-215ENST00000543185 GRAMD1AQ96CP6 724 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 ADPGKQ9BRR6 497 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 SERPING1P05155 500 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 VPS54Q9P1Q0 977 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 DBNLQ9UJU6 430 aaKnown RBP20.88■□□□□ 0.93
HDAC4-215ENST00000543185 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms