RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 BLOC1S4Q9NUP1 217 aa12.63□□□□□ -0.39
LGR5-203ENST00000540815 MAGEC2Q9UBF1 373 aaPredicted RBP12.63□□□□□ -0.39
LGR5-203ENST00000540815 FAN1Q9Y2M0 1017 aa12.63□□□□□ -0.39
LGR5-203ENST00000540815 CHRM1P11229 460 aaPredicted RBP12.62□□□□□ -0.39
LGR5-203ENST00000540815 EEF2P13639 858 aaKnown RBP12.62□□□□□ -0.39
LGR5-203ENST00000540815 GCFC2P16383 781 aaKnown RBP12.62□□□□□ -0.39
LGR5-203ENST00000540815 ACTN2P35609 894 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 TTC31Q49AM3 519 aaPredicted RBP12.62□□□□□ -0.39
LGR5-203ENST00000540815 TATDN1Q6P1N9 297 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 TMTC1Q8IUR5 882 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 CREBRFQ8IUR6 639 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 GOLGA5Q8TBA6 731 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 ZNF507Q8TCN5 953 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 C7orf43Q8WVR3 580 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 NAP1L4Q99733 375 aaKnown RBP12.62□□□□□ -0.39
LGR5-203ENST00000540815 HINFPQ9BQA5 517 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 MRPL44Q9H9J2 332 aaKnown RBP12.62□□□□□ -0.39
LGR5-203ENST00000540815 ARFGAP3Q9NP61 516 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 ATF5Q9Y2D1 282 aaPredicted RBP12.62□□□□□ -0.39
LGR5-203ENST00000540815 RBM5P52756 815 aaKnown RBP eCLIP12.62□□□□□ -0.393e-8■■■□□ 16.9
LGR5-203ENST00000540815 STK4Q13043 487 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 LONRF2Q1L5Z9 754 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 CDK5RAP3Q96JB5 506 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 GDAP1L1Q96MZ0 367 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 NUP88Q99567 741 aaPredicted RBP12.62□□□□□ -0.39
LGR5-203ENST00000540815 PSTPIP2Q9H939 334 aa12.62□□□□□ -0.39
LGR5-203ENST00000540815 DDX25Q9UHL0 483 aaKnown RBP12.62□□□□□ -0.39
LGR5-203ENST00000540815 HOXA7P31268 230 aaPredicted RBP12.61□□□□□ -0.39
LGR5-203ENST00000540815 PSEN1P49768 467 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 TMEM119Q4V9L6 283 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 SIAH1Q8IUQ4 282 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 DHX37Q8IY37 1157 aaKnown RBP12.61□□□□□ -0.39
LGR5-203ENST00000540815 CSGALNACT2Q8N6G5 542 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 LARP4BQ92615 738 aaKnown RBP12.61□□□□□ -0.39
LGR5-203ENST00000540815 CNKSR1Q969H4 720 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 KIFC2Q96AC6 838 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
LGR5-203ENST00000540815 PVALEFA0A1B0GWK0 134 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 FCER1AP12319 257 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 KRT79Q5XKE5 535 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 SLFN13Q68D06 897 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 UNC13DQ70J99 1090 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 FAM114A1Q8IWE2 563 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 RAD54LQ92698 747 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 GEMIN8Q9NWZ8 242 aaKnown RBP12.61□□□□□ -0.39
LGR5-203ENST00000540815 POTEMA6NI47 508 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 MYMKA6NI61 221 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 RNF225M0QZC1 329 aaPredicted RBP12.61□□□□□ -0.39
LGR5-203ENST00000540815 SLC1A4P43007 532 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 DNM2P50570 870 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 ERVK-24P63145 666 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 MAP3K9P80192 1104 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 AOC3Q16853 763 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 QRICH1Q2TAL8 776 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 DNAJC21Q5F1R6 531 aaKnown RBP12.61□□□□□ -0.39
LGR5-203ENST00000540815 ANKRD40Q6AI12 368 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 TMEM179Q6ZVK1 233 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 KIAA0895Q8NCT3 520 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 SNX29Q8TEQ0 813 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 LRRC27Q9C0I9 530 aa12.61□□□□□ -0.39
LGR5-203ENST00000540815 CWC15Q9P013 229 aaKnown RBP12.61□□□□□ -0.39
LGR5-203ENST00000540815 COL2A1P02458 1487 aaPredicted RBP12.61□□□□□ -0.39
LGR5-203ENST00000540815 PSME4Q14997 1843 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 ATRNL1Q5VV63 1379 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 KRT9P35527 623 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 PPP2R3AQ06190 1150 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 LEKR1Q6ZMV7 388 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 ZSCAN29Q8IWY8 852 aaPredicted RBP12.6□□□□□ -0.39
LGR5-203ENST00000540815 HAS1Q92839 578 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 RHOXF2BP0C7M4 288 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 GUCY2CP25092 1073 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 JAG1P78504 1218 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 SEPT2Q15019 361 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 GMCL1P1Q8NEA9 526 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 NUDT12Q9BQG2 462 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 RHOXF2Q9BQY4 288 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 TUBGCP2Q9BSJ2 902 aa12.6□□□□□ -0.39
LGR5-203ENST00000540815 YDJCA8MPS7 323 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 EFCAB8A8MWE9 144 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 ENTPD3O75355 529 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 ICA1Q05084 483 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 CDC37Q16543 378 aaPredicted RBP12.59□□□□□ -0.39
LGR5-203ENST00000540815 CENPPQ6IPU0 288 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 KCNG1Q9UIX4 513 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 CAPN11Q9UMQ6 739 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 MRFAP1Q9Y605 127 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 SLC26A4O43511 780 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 USP11P51784 963 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 HYIQ5T013 277 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.59□□□□□ -0.39
LGR5-203ENST00000540815 SUPT20HQ8NEM7 779 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 CCDC102AQ96A19 550 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 CNOT6LQ96LI5 555 aaKnown RBP12.59□□□□□ -0.39
LGR5-203ENST00000540815 DNAJC7Q99615 494 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 SEMA6BQ9H3T3 888 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 PCDHA1Q9Y5I3 950 aa12.59□□□□□ -0.39
LGR5-203ENST00000540815 TTC26A0AVF1 554 aa12.58□□□□□ -0.4
LGR5-203ENST00000540815 KIF5CO60282 957 aa12.58□□□□□ -0.4
LGR5-203ENST00000540815 RRP1BQ14684 758 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms