RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ECM1Q16610 540 aa27.65■■■□□ 2.02
TTC3-225ENST00000540756 PRRT2Q7Z6L0 340 aaPredicted RBP27.65■■■□□ 2.02
TTC3-225ENST00000540756 IL31RAQ8NI17 732 aa27.65■■■□□ 2.02
TTC3-225ENST00000540756 SYTL5Q8TDW5 730 aaPredicted RBP27.65■■■□□ 2.02
TTC3-225ENST00000540756 PYM1Q9BRP8 204 aaKnown RBP27.65■■■□□ 2.02
TTC3-225ENST00000540756 RNF146Q9NTX7 359 aa27.65■■■□□ 2.02
TTC3-225ENST00000540756 FDX1P10109 184 aa27.64■■■□□ 2.02
TTC3-225ENST00000540756 MORC3Q14149 939 aa27.64■■■□□ 2.02
TTC3-225ENST00000540756 ARMC9Q7Z3E5 817 aa27.64■■■□□ 2.02
TTC3-225ENST00000540756 MCF2L2Q86YR7 1114 aa27.64■■■□□ 2.02
TTC3-225ENST00000540756 TEX2Q8IWB9 1127 aa27.64■■■□□ 2.02
TTC3-225ENST00000540756 HOXC10Q9NYD6 342 aa27.64■■■□□ 2.02
TTC3-225ENST00000540756 GJA5P36382 358 aa27.63■■■□□ 2.01
TTC3-225ENST00000540756 PLS1Q14651 629 aa27.63■■■□□ 2.01
TTC3-225ENST00000540756 NSMFQ6X4W1 530 aa27.63■■■□□ 2.01
TTC3-225ENST00000540756 SNX29Q8TEQ0 813 aa27.63■■■□□ 2.01
TTC3-225ENST00000540756 PPP1R9BQ96SB3 815 aa27.63■■■□□ 2.01
TTC3-225ENST00000540756 LOC285556D6RIA3 1793 aa27.63■■■□□ 2.01
TTC3-225ENST00000540756 RBBP6Q7Z6E9 1792 aaKnown RBP27.63■■■□□ 2.01
TTC3-225ENST00000540756 GHRHRQ02643 423 aa27.63■■■□□ 2.01
TTC3-225ENST00000540756 CCDC173Q0VFZ6 552 aa27.63■■■□□ 2.01
TTC3-225ENST00000540756 LDLRAD1Q5T700 205 aa27.63■■■□□ 2.01
TTC3-225ENST00000540756 TAAR1Q96RJ0 339 aa27.63■■■□□ 2.01
TTC3-225ENST00000540756 RAB34Q9BZG1 259 aa27.63■■■□□ 2.01
TTC3-225ENST00000540756 SPIRE1Q08AE8 756 aa27.62■■■□□ 2.01
TTC3-225ENST00000540756 CCDC34Q96HJ3 373 aa27.62■■■□□ 2.01
TTC3-225ENST00000540756 PDLIM2Q96JY6 352 aa27.62■■■□□ 2.01
TTC3-225ENST00000540756 NAT10Q9H0A0 1025 aaKnown RBP27.62■■■□□ 2.01
TTC3-225ENST00000540756 ADCY5O95622 1261 aa27.62■■■□□ 2.01
TTC3-225ENST00000540756 KCNK18Q7Z418 384 aa27.62■■■□□ 2.01
TTC3-225ENST00000540756 KBTBD4Q9NVX7 518 aa27.62■■■□□ 2.01
TTC3-225ENST00000540756 RPTORQ8N122 1335 aa27.61■■■□□ 2.01
TTC3-225ENST00000540756 GTPBP6O43824 516 aaPredicted RBP27.61■■■□□ 2.01
TTC3-225ENST00000540756 SMC2O95347 1197 aa27.61■■■□□ 2.01
TTC3-225ENST00000540756 RNF207Q6ZRF8 634 aa27.61■■■□□ 2.01
TTC3-225ENST00000540756 SLFN12Q8IYM2 578 aa27.61■■■□□ 2.01
TTC3-225ENST00000540756 ZNF526Q8TF50 670 aaPredicted RBP27.61■■■□□ 2.01
TTC3-225ENST00000540756 CALML4Q96GE6 196 aa27.61■■■□□ 2.01
TTC3-225ENST00000540756 BLOC1S4Q9NUP1 217 aa27.61■■■□□ 2.01
TTC3-225ENST00000540756 KCNH4Q9UQ05 1017 aa27.61■■■□□ 2.01
TTC3-225ENST00000540756 PPIL2Q13356 520 aa27.6■■■□□ 2.01
TTC3-225ENST00000540756 MOGSQ13724 837 aa27.6■■■□□ 2.01
TTC3-225ENST00000540756 BAATQ14032 418 aaPredicted RBP27.6■■■□□ 2.01
TTC3-225ENST00000540756 DHX8Q14562 1220 aaKnown RBP27.6■■■□□ 2.01
TTC3-225ENST00000540756 KRT79Q5XKE5 535 aa27.6■■■□□ 2.01
TTC3-225ENST00000540756 SMYD4Q8IYR2 804 aaPredicted RBP27.6■■■□□ 2.01
TTC3-225ENST00000540756 NMRK2Q9NPI5 230 aa27.6■■■□□ 2.01
TTC3-225ENST00000540756 BECN2A8MW95 431 aa27.6■■■□□ 2.01
TTC3-225ENST00000540756 CXCL11O14625 94 aa27.6■■■□□ 2.01
TTC3-225ENST00000540756 TBX3O15119 743 aa27.6■■■□□ 2.01
TTC3-225ENST00000540756 OAZ1P54368 228 aa27.6■■■□□ 2.01
TTC3-225ENST00000540756 CEP55Q53EZ4 464 aa27.6■■■□□ 2.01
TTC3-225ENST00000540756 PLA2G4DQ86XP0 818 aa27.6■■■□□ 2.01
TTC3-225ENST00000540756 TEX13BQ9BXU2 312 aa27.6■■■□□ 2.01
TTC3-225ENST00000540756 ARP10275 920 aa27.59■■■□□ 2.01
TTC3-225ENST00000540756 ITGB5P18084 799 aa27.59■■■□□ 2.01
TTC3-225ENST00000540756 EIF2AK2P19525 551 aaKnown RBP27.59■■■□□ 2.01
TTC3-225ENST00000540756 BPIFA3Q9BQP9 254 aa27.59■■■□□ 2.01
TTC3-225ENST00000540756 EHMT1Q9H9B1 1298 aa27.59■■■□□ 2.01
TTC3-225ENST00000540756 BTBD7Q9P203 1132 aa27.59■■■□□ 2.01
TTC3-225ENST00000540756 ATP2A1O14983 1001 aa27.58■■■□□ 2.01
TTC3-225ENST00000540756 NCAPHQ15003 741 aa27.58■■■□□ 2.01
TTC3-225ENST00000540756 PROCA1Q8NCQ7 364 aaPredicted RBP27.58■■■□□ 2.01
TTC3-225ENST00000540756 FAM20AQ96MK3 541 aa27.58■■■□□ 2.01
TTC3-225ENST00000540756 GSDMAQ96QA5 445 aa27.58■■■□□ 2.01
TTC3-225ENST00000540756 VAV3Q9UKW4 847 aa27.58■■■□□ 2.01
TTC3-225ENST00000540756 MYPNQ86TC9 1320 aa27.58■■■□□ 2.01
TTC3-225ENST00000540756 GOLGA6L19H0YKK7 550 aa27.58■■■□□ 2.01
TTC3-225ENST00000540756 HOXA7P31268 230 aaPredicted RBP27.58■■■□□ 2.01
TTC3-225ENST00000540756 MEIS1O00470 390 aa27.57■■■□□ 2
TTC3-225ENST00000540756 CD44P16070 742 aaKnown RBP27.57■■■□□ 2
TTC3-225ENST00000540756 CCT6AP40227 531 aaKnown RBP27.57■■■□□ 2
TTC3-225ENST00000540756 MRPS9P82933 396 aaKnown RBP27.57■■■□□ 2
TTC3-225ENST00000540756 MCM6Q14566 821 aa27.57■■■□□ 2
TTC3-225ENST00000540756 TMEM119Q4V9L6 283 aa27.57■■■□□ 2
TTC3-225ENST00000540756 NCAPH2Q6IBW4 605 aa27.57■■■□□ 2
TTC3-225ENST00000540756 LBX2Q6XYB7 198 aa27.57■■■□□ 2
TTC3-225ENST00000540756 CDK5RAP3Q96JB5 506 aa27.57■■■□□ 2
TTC3-225ENST00000540756 PNMA2Q9UL42 364 aa27.57■■■□□ 2
TTC3-225ENST00000540756 TRIML1Q8N9V2 468 aa27.57■■■□□ 2
TTC3-225ENST00000540756 SLC10A4Q96EP9 437 aa27.57■■■□□ 2
TTC3-225ENST00000540756 RMDN3Q96TC7 470 aa27.57■■■□□ 2
TTC3-225ENST00000540756 ASCC2Q9H1I8 757 aaPredicted RBP27.57■■■□□ 2
TTC3-225ENST00000540756 MED24O75448 989 aa27.56■■■□□ 2
TTC3-225ENST00000540756 RPN1P04843 607 aaKnown RBP27.56■■■□□ 2
TTC3-225ENST00000540756 MED15Q96RN5 788 aa27.56■■■□□ 2
TTC3-225ENST00000540756 MXRA8Q9BRK3 442 aa27.56■■■□□ 2
TTC3-225ENST00000540756 WDR11Q9BZH6 1224 aa27.56■■■□□ 2
TTC3-225ENST00000540756 MAP3K20Q9NYL2 800 aaKnown RBP27.56■■■□□ 2
TTC3-225ENST00000540756 POTEB3A0JP26 581 aa27.55■■■□□ 2
TTC3-225ENST00000540756 EML1O00423 815 aa27.55■■■□□ 2
TTC3-225ENST00000540756 PGM5Q15124 567 aa27.55■■■□□ 2
TTC3-225ENST00000540756 POTEBQ6S5H4 581 aa27.55■■■□□ 2
TTC3-225ENST00000540756 HSD3B7Q9H2F3 369 aa27.55■■■□□ 2
TTC3-225ENST00000540756 R3HDMLQ9H3Y0 253 aa27.55■■■□□ 2
TTC3-225ENST00000540756 CUEDC2Q9H467 287 aa27.55■■■□□ 2
TTC3-225ENST00000540756 SOCS7O14512 581 aa27.55■■■□□ 2
TTC3-225ENST00000540756 KLRC4O43908 158 aa27.55■■■□□ 2
TTC3-225ENST00000540756 IRX3P78415 501 aaPredicted RBP27.55■■■□□ 2
TTC3-225ENST00000540756 MKRN3Q13064 507 aaKnown RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms