RNA–Protein interactions for RNA: ENST00000540162.5

MRPL48-209, Transcript of mitochondrial ribosomal protein L48, human

TSL 5

Gene MRPL48, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL48-209	ENST00000540162	HDAC6	Q9UBN7	1215 aa		13.57	□□□□□ -0.24
MRPL48-209	ENST00000540162	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.57	□□□□□ -0.24
MRPL48-209	ENST00000540162	SALL3	Q9BXA9	1300 aa		13.57	□□□□□ -0.24
MRPL48-209	ENST00000540162	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.56	□□□□□ -0.24
MRPL48-209	ENST00000540162	GPR37L1	O60883	481 aa		13.56	□□□□□ -0.24
MRPL48-209	ENST00000540162	GJB5	O95377	273 aa		13.56	□□□□□ -0.24
MRPL48-209	ENST00000540162	CXCL10	P02778	98 aa		13.56	□□□□□ -0.24
MRPL48-209	ENST00000540162	ERVK-21	P61565	698 aa		13.56	□□□□□ -0.24
MRPL48-209	ENST00000540162	STXBP2	Q15833	593 aa		13.56	□□□□□ -0.24
MRPL48-209	ENST00000540162	DGKD	Q16760	1214 aa		13.56	□□□□□ -0.24
MRPL48-209	ENST00000540162	NSUN6	Q8TEA1	469 aa	Known RBP	13.56	□□□□□ -0.24
MRPL48-209	ENST00000540162	TGS1	Q96RS0	853 aa	Known RBP	13.56	□□□□□ -0.24
MRPL48-209	ENST00000540162	ALG1	Q9BT22	464 aa		13.56	□□□□□ -0.24
MRPL48-209	ENST00000540162	GTF2IRD1	Q9UHL9	959 aa		13.56	□□□□□ -0.24
MRPL48-209	ENST00000540162	GBF1	Q92538	1859 aa		13.56	□□□□□ -0.24
MRPL48-209	ENST00000540162	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	LINC01553	A4QN01	128 aa		13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	PI4K2B	G5E9Z4	385 aa		13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	PARN	O95453	639 aa	Known RBP	13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	PSEN2	P49810	448 aa		13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	ZNF200	P98182	395 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	RBL2	Q08999	1139 aa		13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	NMI	Q13287	307 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	IKBKE	Q14164	716 aa		13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	GPATCH4	Q5T3I0	446 aa	Known RBP	13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	TBC1D10C	Q8IV04	446 aa		13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	IWS1	Q96ST2	819 aa		13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	CRBN	Q96SW2	442 aa		13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	RMDN3	Q96TC7	470 aa		13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	UBE2Z	Q9H832	354 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	DDX41	Q9UJV9	622 aa	Known RBP	13.55	□□□□□ -0.24
MRPL48-209	ENST00000540162	TCF20	Q9UGU0	1960 aa	Known RBP	13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	EIF3J	O75822	258 aa	Known RBP	13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	PDE1A	P54750	535 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	PTK7	Q13308	1070 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	LAMC2	Q13753	1193 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	MFSD10	Q14728	455 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	CDC37	Q16543	378 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	KIAA0753	Q2KHM9	967 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	TRIM71	Q2Q1W2	868 aa	Known RBP	13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	ZNF618	Q5T7W0	954 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	ARHGEF16	Q5VV41	709 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	TRAF7	Q6Q0C0	670 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	DGKH	Q86XP1	1220 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	MCF2L2	Q86YR7	1114 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	ADGRF4	Q8IZF3	695 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	WNT8B	Q93098	351 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	VAT1L	Q9HCJ6	419 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	ABCB11	O95342	1321 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	MYO9B	Q13459	2157 aa		13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.54	□□□□□ -0.24
MRPL48-209	ENST00000540162	LCT	P09848	1927 aa		13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	EFCAB14	O75071	495 aa		13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	NR3C2	P08235	984 aa		13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	ZNF286B	P0CG31	522 aa		13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	PC	P11498	1178 aa	Known RBP	13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	EIF2AK2	P19525	551 aa	Known RBP	13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	KCNA5	P22460	613 aa		13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	HIC1	Q14526	733 aa		13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	MBTPS1	Q14703	1052 aa		13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	PPP4R3CP	Q6ZMV5	832 aa		13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	DHX37	Q8IY37	1157 aa	Known RBP	13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	GJD3	Q8N144	294 aa		13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	ESR2	Q92731	530 aa		13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	C17orf80	Q9BSJ5	609 aa		13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	MAF1	Q9H063	256 aa		13.53	□□□□□ -0.24
MRPL48-209	ENST00000540162	SCN5A	Q14524	2016 aa		13.52	□□□□□ -0.24
MRPL48-209	ENST00000540162	HAS3	O00219	553 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	SORBS3	O60504	671 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	LGR5	O75473	907 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	QRICH1	Q2TAL8	776 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	LEXM	Q3ZCV2	418 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	FBXO11	Q86XK2	927 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	FAM178B	Q8IXR5	827 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	PNMA1	Q8ND90	353 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	DBF4B	Q8NFT6	615 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	PPTC7	Q8NI37	304 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	EMID1	Q96A84	441 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	KATNAL1	Q9BW62	490 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	RNF41	Q9H4P4	317 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	KAT14	Q9H8E8	782 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	JMJD4	Q9H9V9	463 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	MRPL11	Q9Y3B7	192 aa	Known RBP	13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	INSL6	Q9Y581	213 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	MRVI1	Q9Y6F6	885 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	ZMYM6	O95789	1325 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	NEDD4	P46934	1319 aa		13.52	□□□□□ -0.25
MRPL48-209	ENST00000540162	SCN10A	Q9Y5Y9	1956 aa		13.51	□□□□□ -0.25
MRPL48-209	ENST00000540162	CCDC171	Q6TFL3	1326 aa		13.51	□□□□□ -0.25
MRPL48-209	ENST00000540162	ZNF213	O14771	459 aa		13.51	□□□□□ -0.25
MRPL48-209	ENST00000540162	DHX16	O60231	1041 aa	Known RBP	13.51	□□□□□ -0.25
MRPL48-209	ENST00000540162	PPFIA4	O75335	1185 aa		13.51	□□□□□ -0.25
MRPL48-209	ENST00000540162	F2	P00734	622 aa		13.51	□□□□□ -0.25
MRPL48-209	ENST00000540162	CFB	P00751	764 aa		13.51	□□□□□ -0.25
MRPL48-209	ENST00000540162	IL9	P15248	144 aa		13.51	□□□□□ -0.25
MRPL48-209	ENST00000540162	FBXO22	Q8NEZ5	403 aa		13.51	□□□□□ -0.25

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