RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 P2RX5Q93086 422 aa23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 BAG1Q99933 345 aaPredicted RBP23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 TAB2Q9NYJ8 693 aa23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 PAXBP1Q9Y5B6 917 aa23.07■■□□□ 1.28
SMPDL3A-203ENST00000539041 AKR1B15C9JRZ8 316 aaPredicted RBP23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 FCER1AP12319 257 aa23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 GTF2F1P35269 517 aaKnown RBP eCLIP23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 ADKP55263 362 aaKnown RBP23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 VPS16Q9H269 839 aa23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 PPP1R1BQ9UD71 204 aaPredicted RBP23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 LTBP3Q9NS15 1303 aa23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 RIOK3O14730 519 aaKnown RBP23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 STX10O60499 249 aa23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 EEF1GP26641 437 aaKnown RBP23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 CIITAP33076 1130 aa23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 TNFAIP1Q13829 316 aa23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 RASA3Q14644 834 aa23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 ZYXQ15942 572 aaKnown RBP23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 ECM1Q16610 540 aa23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 IRF2BP1Q8IU81 584 aa23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 ETNPPLQ8TBG4 499 aa23.06■■□□□ 1.28
SMPDL3A-203ENST00000539041 DICER1Q9UPY3 1922 aaKnown RBP23.05■■□□□ 1.28
SMPDL3A-203ENST00000539041 DYMQ7RTS9 669 aa23.05■■□□□ 1.28
SMPDL3A-203ENST00000539041 KIAA0895Q8NCT3 520 aa23.05■■□□□ 1.28
SMPDL3A-203ENST00000539041 PANX2Q96RD6 677 aa23.05■■□□□ 1.28
SMPDL3A-203ENST00000539041 DUSP9Q99956 384 aaKnown RBP23.05■■□□□ 1.28
SMPDL3A-203ENST00000539041 SRRTQ9BXP5 876 aaKnown RBP23.05■■□□□ 1.28
SMPDL3A-203ENST00000539041 FEM1BQ9UK73 627 aa23.05■■□□□ 1.28
SMPDL3A-203ENST00000539041 BCS1LQ9Y276 419 aa23.05■■□□□ 1.28
SMPDL3A-203ENST00000539041 PARP14Q460N5 1801 aa23.05■■□□□ 1.28
SMPDL3A-203ENST00000539041 CYP3A4P08684 503 aa23.04■■□□□ 1.28
SMPDL3A-203ENST00000539041 HOXA13P31271 388 aaPredicted RBP23.04■■□□□ 1.28
SMPDL3A-203ENST00000539041 PRR16Q569H4 304 aa23.04■■□□□ 1.28
SMPDL3A-203ENST00000539041 CCDC174Q6PII3 467 aa23.04■■□□□ 1.28
SMPDL3A-203ENST00000539041 KIFC2Q96AC6 838 aa23.04■■□□□ 1.28
SMPDL3A-203ENST00000539041 MAGEC2Q9UBF1 373 aaPredicted RBP23.04■■□□□ 1.28
SMPDL3A-203ENST00000539041 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.04■■□□□ 1.28
SMPDL3A-203ENST00000539041 CD2APQ9Y5K6 639 aa23.04■■□□□ 1.28
SMPDL3A-203ENST00000539041 RBL2Q08999 1139 aa23.04■■□□□ 1.28
SMPDL3A-203ENST00000539041 CREBRFQ8IUR6 639 aa23.04■■□□□ 1.28
SMPDL3A-203ENST00000539041 LENG9Q96B70 501 aa23.04■■□□□ 1.28
SMPDL3A-203ENST00000539041 GLIS2Q9BZE0 524 aaPredicted RBP23.04■■□□□ 1.28
SMPDL3A-203ENST00000539041 LOXHD1Q8IVV2 1947 aa23.03■■□□□ 1.28
SMPDL3A-203ENST00000539041 PSMD2Q13200 908 aa23.03■■□□□ 1.28
SMPDL3A-203ENST00000539041 CSGALNACT2Q8N6G5 542 aa23.03■■□□□ 1.28
SMPDL3A-203ENST00000539041 DDX12PQ92771 950 aa23.03■■□□□ 1.28
SMPDL3A-203ENST00000539041 FAM20AQ96MK3 541 aa23.03■■□□□ 1.28
SMPDL3A-203ENST00000539041 TEPSINQ96N21 525 aa23.03■■□□□ 1.28
SMPDL3A-203ENST00000539041 SLC39A2Q9NP94 309 aa23.03■■□□□ 1.28
SMPDL3A-203ENST00000539041 MRPL11Q9Y3B7 192 aaKnown RBP23.03■■□□□ 1.28
SMPDL3A-203ENST00000539041 PHF20L1A8MW92 1017 aa23.02■■□□□ 1.28
SMPDL3A-203ENST00000539041 TPM1P09493 284 aa23.02■■□□□ 1.28
SMPDL3A-203ENST00000539041 TRIM14Q14142 442 aa23.02■■□□□ 1.28
SMPDL3A-203ENST00000539041 HAUS3Q68CZ6 603 aa23.02■■□□□ 1.28
SMPDL3A-203ENST00000539041 ANKRD40Q6AI12 368 aa23.02■■□□□ 1.28
SMPDL3A-203ENST00000539041 FAM114A1Q8IWE2 563 aa23.02■■□□□ 1.28
SMPDL3A-203ENST00000539041 ZNF592Q92610 1267 aa23.02■■□□□ 1.28
SMPDL3A-203ENST00000539041 UIMC1Q96RL1 719 aa23.02■■□□□ 1.28
SMPDL3A-203ENST00000539041 STK24Q9Y6E0 443 aa23.02■■□□□ 1.28
SMPDL3A-203ENST00000539041 ABCB11O95342 1321 aa23.02■■□□□ 1.28
SMPDL3A-203ENST00000539041 FAM86B1E9PN63 330 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 ZSCAN12O43309 604 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 MFAP3LO75121 409 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 TUBB4AP04350 444 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 FAM86B2P0C5J1 330 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 IDEP14735 1019 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 EHHADHQ08426 723 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 SPIRE1Q08AE8 756 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 CCDC84Q86UT8 332 aaPredicted RBP23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 CNGA4Q8IV77 575 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 ERMNQ8TAM6 284 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 HPS3Q969F9 1004 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 CCDC51Q96ER9 411 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 FEZ1Q99689 392 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 GINM1Q9NU53 330 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 KIAA1024Q9UPX6 916 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 POTEB3A0JP26 581 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 LGALS16A8MUM7 142 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 POTECB2RU33 542 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 GCOM1H8Y6P7 765 aaPredicted RBP23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 EGFRP00533 1210 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 CFBP00751 764 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 POLR2MP0CAP2 368 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 ZNF76P36508 570 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 STAT3P40763 770 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 GMPSP49915 693 aaPredicted RBP23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 RASSF7Q02833 373 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 POTEBQ6S5H4 581 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 MICALL2Q8IY33 904 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 GUF1Q8N442 669 aaKnown RBP23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 DNAJC19Q96DA6 116 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 NAA15Q9BXJ9 866 aaKnown RBP23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 ZNF341Q9BYN7 854 aa23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 SCAF8Q9UPN6 1271 aaKnown RBP23.01■■□□□ 1.27
SMPDL3A-203ENST00000539041 E9PMD0 336 aa23■■□□□ 1.27
SMPDL3A-203ENST00000539041 MED24O75448 989 aa23■■□□□ 1.27
SMPDL3A-203ENST00000539041 GYPCP04921 128 aa23■■□□□ 1.27
SMPDL3A-203ENST00000539041 UBXN1Q04323 297 aa23■■□□□ 1.27
SMPDL3A-203ENST00000539041 CENPPQ6IPU0 288 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms