RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 SEC16BQ96JE7 1060 aa7.46□□□□□ -1.21
SSPN-206ENST00000539019 FGD4Q96M96 766 aa7.46□□□□□ -1.21
SSPN-206ENST00000539019 PTCHD1Q96NR3 888 aa7.46□□□□□ -1.21
SSPN-206ENST00000539019 MCMBPQ9BTE3 642 aa7.46□□□□□ -1.21
SSPN-206ENST00000539019 TNFRSF12AQ9NP84 129 aa7.46□□□□□ -1.21
SSPN-206ENST00000539019 FER1L4A9Z1Z3 1794 aa7.46□□□□□ -1.22
SSPN-206ENST00000539019 CAMSAP1Q5T5Y3 1602 aa7.46□□□□□ -1.22
SSPN-206ENST00000539019 VAMP4O75379 141 aa7.46□□□□□ -1.22
SSPN-206ENST00000539019 EPHX1P07099 455 aa7.46□□□□□ -1.22
SSPN-206ENST00000539019 CDR1P51861 262 aa7.46□□□□□ -1.22
SSPN-206ENST00000539019 CBX2Q14781 532 aaPredicted RBP7.46□□□□□ -1.22
SSPN-206ENST00000539019 ZNF385BQ569K4 471 aa7.46□□□□□ -1.22
SSPN-206ENST00000539019 OLFML2BQ68BL8 750 aa7.46□□□□□ -1.22
SSPN-206ENST00000539019 CYP2R1Q6VVX0 501 aa7.46□□□□□ -1.22
SSPN-206ENST00000539019 FAM169BQ8N8A8 192 aa7.46□□□□□ -1.22
SSPN-206ENST00000539019 PANK1Q8TE04 598 aa7.46□□□□□ -1.22
SSPN-206ENST00000539019 SIGLEC10Q96LC7 697 aa7.46□□□□□ -1.22
SSPN-206ENST00000539019 INPP5FQ9Y2H2 1132 aa7.46□□□□□ -1.22
SSPN-206ENST00000539019 DHX57Q6P158 1386 aaKnown RBP7.45□□□□□ -1.22
SSPN-206ENST00000539019 TNRQ92752 1358 aa7.45□□□□□ -1.22
SSPN-206ENST00000539019 TET3O43151 1660 aa7.45□□□□□ -1.22
SSPN-206ENST00000539019 ZC3H13Q5T200 1668 aaKnown RBP7.45□□□□□ -1.22
SSPN-206ENST00000539019 E9PCH4 1651 aa7.45□□□□□ -1.22
SSPN-206ENST00000539019 KANK1Q14678 1352 aa7.45□□□□□ -1.22
SSPN-206ENST00000539019 N4BP3O15049 544 aa7.45□□□□□ -1.22
SSPN-206ENST00000539019 CASP7P55210 303 aa7.45□□□□□ -1.22
SSPN-206ENST00000539019 TMC6Q7Z403 805 aa7.45□□□□□ -1.22
SSPN-206ENST00000539019 GBP3Q9H0R5 595 aa7.45□□□□□ -1.22
SSPN-206ENST00000539019 IRAK3Q9Y616 596 aa7.45□□□□□ -1.22
SSPN-206ENST00000539019 SPATA31E1Q6ZUB1 1445 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 UGGT1Q9NYU2 1555 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 ARHGAP23Q9P227 1491 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 PPM1BO75688 479 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 TBC1D8O95759 1140 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 PI3P19957 117 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 TMEM62Q0P6H9 643 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 KIAA1211LQ6NV74 962 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 RPTNQ6XPR3 784 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 LDHDQ86WU2 507 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 MZB1Q8WU39 189 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 EPB41L4AQ9HCS5 686 aaPredicted RBP7.44□□□□□ -1.22
SSPN-206ENST00000539019 SUSD2Q9UGT4 822 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 CEP152O94986 1710 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 PIK3C2BO00750 1634 aa7.44□□□□□ -1.22
SSPN-206ENST00000539019 NLRP1Q9C000 1473 aa7.43□□□□□ -1.22
SSPN-206ENST00000539019 RFXAPO00287 272 aa7.43□□□□□ -1.22
SSPN-206ENST00000539019 AURKAO14965 403 aa7.43□□□□□ -1.22
SSPN-206ENST00000539019 DPY19L1Q2PZI1 675 aa7.43□□□□□ -1.22
SSPN-206ENST00000539019 ARHGEF39Q8N4T4 335 aa7.43□□□□□ -1.22
SSPN-206ENST00000539019 PCGF6Q9BYE7 350 aa7.43□□□□□ -1.22
SSPN-206ENST00000539019 CCSER2Q9H7U1 834 aa7.43□□□□□ -1.22
SSPN-206ENST00000539019 PDLIM7Q9NR12 457 aa7.43□□□□□ -1.22
SSPN-206ENST00000539019 SLC52A1Q9NWF4 448 aa7.43□□□□□ -1.22
SSPN-206ENST00000539019 TRPM2O94759 1503 aa7.43□□□□□ -1.22
SSPN-206ENST00000539019 A2ML1A8K2U0 1454 aa7.42□□□□□ -1.22
SSPN-206ENST00000539019 PREX1Q8TCU6 1659 aa7.42□□□□□ -1.22
SSPN-206ENST00000539019 NR1I3Q14994 352 aa7.42□□□□□ -1.22
SSPN-206ENST00000539019 RCSD1Q6JBY9 416 aa7.42□□□□□ -1.22
SSPN-206ENST00000539019 VHLLQ6RSH7 139 aa7.42□□□□□ -1.22
SSPN-206ENST00000539019 TTLL10Q6ZVT0 673 aa7.42□□□□□ -1.22
SSPN-206ENST00000539019 IGDCC3Q8IVU1 814 aa7.42□□□□□ -1.22
SSPN-206ENST00000539019 TMEFF1Q8IYR6 380 aa7.42□□□□□ -1.22
SSPN-206ENST00000539019 NLGN2Q8NFZ4 835 aa7.42□□□□□ -1.22
SSPN-206ENST00000539019 ANAPC16Q96DE5 110 aa7.42□□□□□ -1.22
SSPN-206ENST00000539019 CGGBP1Q9UFW8 167 aaPredicted RBP7.42□□□□□ -1.22
SSPN-206ENST00000539019 SUGT1Q9Y2Z0 365 aa7.42□□□□□ -1.22
SSPN-206ENST00000539019 ZFYVE9O95405 1425 aa7.42□□□□□ -1.22
SSPN-206ENST00000539019 A0A1W2PQJ5 194 aa7.41□□□□□ -1.22
SSPN-206ENST00000539019 STXBP3O00186 592 aa7.41□□□□□ -1.22
SSPN-206ENST00000539019 IRS4O14654 1257 aaPredicted RBP7.41□□□□□ -1.22
SSPN-206ENST00000539019 ATF4P18848 351 aaPredicted RBP7.41□□□□□ -1.22
SSPN-206ENST00000539019 L1CAMP32004 1257 aa7.41□□□□□ -1.22
SSPN-206ENST00000539019 HSPA2P54652 639 aa7.41□□□□□ -1.22
SSPN-206ENST00000539019 NCKAP1LP55160 1127 aa7.41□□□□□ -1.22
SSPN-206ENST00000539019 TCERG1LQ5VWI1 586 aa7.41□□□□□ -1.22
SSPN-206ENST00000539019 EEF1DP3Q658K8 133 aa7.41□□□□□ -1.22
SSPN-206ENST00000539019 BICRALQ6AI39 1079 aa7.41□□□□□ -1.22
SSPN-206ENST00000539019 ZNF513Q8N8E2 541 aaPredicted RBP7.41□□□□□ -1.22
SSPN-206ENST00000539019 RCC1LQ96I51 464 aaKnown RBP7.41□□□□□ -1.22
SSPN-206ENST00000539019 STRIP2Q9ULQ0 834 aa7.41□□□□□ -1.22
SSPN-206ENST00000539019 PCDHA5Q9Y5H7 936 aa7.41□□□□□ -1.22
SSPN-206ENST00000539019 ADAMTS20P59510 1910 aa7.41□□□□□ -1.22
SSPN-206ENST00000539019 SETD1BQ9UPS6 1966 aaKnown RBP7.4□□□□□ -1.22
SSPN-206ENST00000539019 SLIT1O75093 1534 aa7.4□□□□□ -1.22
SSPN-206ENST00000539019 CEP170BQ9Y4F5 1589 aaPredicted RBP7.4□□□□□ -1.22
SSPN-206ENST00000539019 DBHP09172 617 aa7.4□□□□□ -1.22
SSPN-206ENST00000539019 INHBBP09529 407 aa7.4□□□□□ -1.22
SSPN-206ENST00000539019 TACR1P25103 407 aa7.4□□□□□ -1.22
SSPN-206ENST00000539019 MAPKAPK2P49137 400 aa7.4□□□□□ -1.22
SSPN-206ENST00000539019 AMPD2Q01433 879 aa7.4□□□□□ -1.22
SSPN-206ENST00000539019 PLEKHN1Q494U1 663 aaPredicted RBP7.4□□□□□ -1.22
SSPN-206ENST00000539019 ZC3H14Q6PJT7 736 aaKnown RBP7.4□□□□□ -1.22
SSPN-206ENST00000539019 PAQR3Q6TCH7 311 aa7.4□□□□□ -1.22
SSPN-206ENST00000539019 DACT3Q96B18 629 aaPredicted RBP7.4□□□□□ -1.22
SSPN-206ENST00000539019 HCFC2Q9Y5Z7 792 aa7.4□□□□□ -1.22
SSPN-206ENST00000539019 TMEM2Q9UHN6 1383 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 UHRF1BP1Q6BDS2 1440 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 TMEM131LA2VDJ0 1609 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 MYO3AQ8NEV4 1616 aa7.39□□□□□ -1.23
SSPN-206ENST00000539019 C2orf71A6NGG8 1288 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms