RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 CCDC84Q86UT8 332 aaPredicted RBP7.39□□□□□ -1.23
USP28-206ENST00000538224 FAM83AQ86UY5 434 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 IRF2BP1Q8IU81 584 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 MTMR14Q8NCE2 650 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 OR8K1Q8NGG5 319 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 CHURC1Q8WUH1 139 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 FAM151AQ8WW52 585 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 ERGIC2Q96RQ1 377 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 PLIN2Q99541 437 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 DNAJC7Q99615 494 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 TUBGCP2Q9BSJ2 902 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 EDEM3Q9BZQ6 932 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 KCNMB3Q9NPA1 279 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 GINM1Q9NU53 330 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 CAPN11Q9UMQ6 739 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 LUC7L2Q9Y383 392 aaKnown RBP7.39□□□□□ -1.23
USP28-206ENST00000538224 RABGAP1Q9Y3P9 1069 aa7.39□□□□□ -1.23
USP28-206ENST00000538224 DOCK1Q14185 1865 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 TRIM49BA6NDI0 452 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 POTEMA6NI47 508 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 MYMKA6NI61 221 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 SOWAHDA6NJG2 315 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 TBC1D12O60347 775 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 URI1O94763 535 aaPredicted RBP7.38□□□□□ -1.23
USP28-206ENST00000538224 GH2P01242 217 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 VIL1P09327 827 aaKnown RBP7.38□□□□□ -1.23
USP28-206ENST00000538224 TRIM21P19474 475 aaKnown RBP7.38□□□□□ -1.23
USP28-206ENST00000538224 MUTP22033 750 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 CIITAP33076 1130 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 ZBED6P86452 979 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 ARHGAP4P98171 946 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 CDK17Q00537 523 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 EHHADHQ08426 723 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 GOLGA8FQ08AF8 430 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 GOLGA8DPQ0D2H9 430 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 STK4Q13043 487 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 SF3B2Q13435 895 aaKnown RBP7.38□□□□□ -1.23
USP28-206ENST00000538224 MCM6Q14566 821 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 SPDYE2Q495Y8 402 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 FAM26FQ5R3K3 315 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 ZNF662Q6ZS27 426 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 SH3BP5LQ7L8J4 393 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 FAM160B2Q86V87 743 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 ZFPM1Q8IX07 1006 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 CCDC170Q8IYT3 715 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 MYOCDQ8IZQ8 938 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 CEP112Q8N8E3 955 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 KIAA0895Q8NCT3 520 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 AGBL3Q8NEM8 1001 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 ZNF507Q8TCN5 953 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 CPLX3Q8WVH0 158 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 UBXN4Q92575 508 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 DDX12PQ92771 950 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 CEP63Q96MT8 703 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 CAMKK2Q96RR4 588 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 DUSP9Q99956 384 aaKnown RBP7.38□□□□□ -1.23
USP28-206ENST00000538224 NOC4LQ9BVI4 516 aaKnown RBP7.38□□□□□ -1.23
USP28-206ENST00000538224 TDRD3Q9H7E2 651 aaKnown RBP7.38□□□□□ -1.23
USP28-206ENST00000538224 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.38□□□□□ -1.23
USP28-206ENST00000538224 PNMA2Q9UL42 364 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 MAPK8IP1Q9UQF2 711 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 TMX2Q9Y320 296 aa7.38□□□□□ -1.23
USP28-206ENST00000538224 MYH11P35749 1972 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 CTAGE9A4FU28 777 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 B4DLN1 442 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 POTEB2H3BUK9 544 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 MEIS2O14770 477 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 GDF11O95390 407 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 KRT18P05783 430 aaKnown RBP7.37□□□□□ -1.23
USP28-206ENST00000538224 CYP3A4P08684 503 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 IDEP14735 1019 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 RPA1P27694 616 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 BAG6P46379 1132 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 PMS1P54277 932 aaKnown RBP7.37□□□□□ -1.23
USP28-206ENST00000538224 CACNB3P54284 484 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 MAP3K9P80192 1104 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 SETQ01105 290 aaPredicted RBP7.37□□□□□ -1.23
USP28-206ENST00000538224 PPP2R3AQ06190 1150 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 TBC1D8BQ0IIM8 1120 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 COASYQ13057 564 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 MEA1Q16626 185 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 ANKRD40Q6AI12 368 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 RAD9BQ6WBX8 426 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 CREBRFQ8IUR6 639 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 NIM1KQ8IY84 436 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 LARGE2Q8N3Y3 721 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 LRRC15Q8TF66 581 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 CRYGNQ8WXF5 182 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 GOLGA1Q92805 767 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 HAS1Q92839 578 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 KIFC2Q96AC6 838 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 PCMTD1Q96MG8 357 aaPredicted RBP7.37□□□□□ -1.23
USP28-206ENST00000538224 TSGA10Q9BZW7 698 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 NUCKS1Q9H1E3 243 aaKnown RBP7.37□□□□□ -1.23
USP28-206ENST00000538224 HAUS4Q9H6D7 363 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 SLC39A2Q9NP94 309 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 KCNQ5Q9NR82 932 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 PANK4Q9NVE7 773 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 ZNF70Q9UC06 446 aaPredicted RBP7.37□□□□□ -1.23
USP28-206ENST00000538224 ZBTB21Q9ULJ3 1066 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms