RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 STXBP3O00186 592 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 PIK3CDO00329 1044 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 EIF3JO75822 258 aaKnown RBP9.71□□□□□ -0.86
SPARC-208ENST00000538026 POLR2MP0CAP2 368 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 MAGEA10P43363 369 aaPredicted RBP9.71□□□□□ -0.86
SPARC-208ENST00000538026 ARHGAP1Q07960 439 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 FAAP100Q0VG06 881 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 PGM5Q15124 567 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 UBE2SQ16763 222 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 C8orf34Q49A92 452 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 HABP4Q5JVS0 413 aaKnown RBP9.71□□□□□ -0.86
SPARC-208ENST00000538026 ARHGEF16Q5VV41 709 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 SEPT14Q6ZU15 432 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 FCHSD1Q86WN1 690 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 NCOA5Q9HCD5 579 aaKnown RBP9.71□□□□□ -0.86
SPARC-208ENST00000538026 PDLIM7Q9NR12 457 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 MAP3K20Q9NYL2 800 aaKnown RBP9.71□□□□□ -0.86
SPARC-208ENST00000538026 ATP11BQ9Y2G3 1177 aa9.71□□□□□ -0.86
SPARC-208ENST00000538026 TET1Q8NFU7 2136 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 A6NJR5 290 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 EDIL3O43854 480 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 CD4P01730 458 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 TXNP10599 105 aaKnown RBP9.7□□□□□ -0.86
SPARC-208ENST00000538026 MYCLP12524 364 aaPredicted RBP9.7□□□□□ -0.86
SPARC-208ENST00000538026 RCAN1P53805 252 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 PSMC6P62333 389 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 CCT2P78371 535 aaKnown RBP9.7□□□□□ -0.86
SPARC-208ENST00000538026 STXBP2Q15833 593 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 NOL8Q76FK4 1167 aaKnown RBP9.7□□□□□ -0.86
SPARC-208ENST00000538026 ANKRD33Q7Z3H0 272 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 SAMD3Q8N6K7 520 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 SCFD2Q8WU76 684 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 PHKBQ93100 1093 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 VWCEQ96DN2 955 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 RBM28Q9NW13 759 aaKnown RBP9.7□□□□□ -0.86
SPARC-208ENST00000538026 ELP1O95163 1332 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 XIRP2A4UGR9 3374 aa9.7□□□□□ -0.86
SPARC-208ENST00000538026 ARVCFO00192 962 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 KIAA0355O15063 1070 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 PQBP1O60828 265 aaKnown RBP9.69□□□□□ -0.86
SPARC-208ENST00000538026 PSMA5P28066 241 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 BMP8BP34820 402 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 METAP2P50579 478 aaKnown RBP eCLIP9.69□□□□□ -0.86
SPARC-208ENST00000538026 EPHB4P54760 987 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 PURAQ00577 322 aaKnown RBP9.69□□□□□ -0.86
SPARC-208ENST00000538026 MDM2Q00987 491 aaPredicted RBP9.69□□□□□ -0.86
SPARC-208ENST00000538026 MYO9BQ13459 2157 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 SYNE3Q6ZMZ3 975 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 HEATR3Q7Z4Q2 680 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 FAM126BQ8IXS8 530 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 PCSK9Q8NBP7 692 aaKnown RBP9.69□□□□□ -0.86
SPARC-208ENST00000538026 OR6J1Q8NGC5 347 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 AFG1LQ8WV93 481 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 KAT2BQ92831 832 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 KIF2CQ99661 725 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 AP5M1Q9H0R1 490 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 PSTPIP2Q9H939 334 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 STARD7Q9NQZ5 370 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 TBX21Q9UL17 535 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 CYP46A1Q9Y6A2 500 aa9.69□□□□□ -0.86
SPARC-208ENST00000538026 SPATA31C2B4DYI2 1134 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 SOX1O00570 391 aaPredicted RBP9.68□□□□□ -0.86
SPARC-208ENST00000538026 SORBS3O60504 671 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 HOXD8P13378 290 aaPredicted RBP9.68□□□□□ -0.86
SPARC-208ENST00000538026 ITGB5P18084 799 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 CLK2P49760 499 aaKnown RBP9.68□□□□□ -0.86
SPARC-208ENST00000538026 FXR1P51114 621 aaKnown RBP eCLIP9.68□□□□□ -0.86
SPARC-208ENST00000538026 HIC1Q14526 733 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 TTLL4Q14679 1199 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 PPP2R5BQ15173 497 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 PFKFB3Q16875 520 aaPredicted RBP9.68□□□□□ -0.86
SPARC-208ENST00000538026 MYSM1Q5VVJ2 828 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 CYP2W1Q8TAV3 490 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 EMID1Q96A84 441 aaPredicted RBP9.68□□□□□ -0.86
SPARC-208ENST00000538026 PGBD1Q96JS3 809 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 GLT1D1Q96MS3 346 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 TOX2Q96NM4 488 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 INPP4AQ96PE3 977 aaPredicted RBP9.68□□□□□ -0.86
SPARC-208ENST00000538026 CTAGE1Q96RT6 745 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 TRPV6Q9H1D0 765 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 ALDH8A1Q9H2A2 487 aaPredicted RBP9.68□□□□□ -0.86
SPARC-208ENST00000538026 SPC25Q9HBM1 224 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 TMEM260Q9NX78 707 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 BARHL2Q9NY43 387 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 RTEL1Q9NZ71 1219 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 SEC63Q9UGP8 760 aaKnown RBP9.68□□□□□ -0.86
SPARC-208ENST00000538026 TPCN1Q9ULQ1 816 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 SCN5AQ14524 2016 aa9.68□□□□□ -0.86
SPARC-208ENST00000538026 NKRFO15226 690 aaKnown RBP eCLIP9.67□□□□□ -0.86
SPARC-208ENST00000538026 PRPF3O43395 683 aaKnown RBP9.67□□□□□ -0.86
SPARC-208ENST00000538026 ATP9AO75110 1047 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 LARGE1O95461 756 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 CTDNEP1O95476 244 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 MMP3P08254 477 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 CLTBP09497 229 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 IFNAR1P17181 557 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 UBA1P22314 1058 aaKnown RBP9.67□□□□□ -0.86
SPARC-208ENST00000538026 CCND2P30279 289 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 ICAM3P32942 547 aa9.67□□□□□ -0.86
SPARC-208ENST00000538026 ANAPC15P60006 121 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms