RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 POTEMA6NI47 508 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 USP17L15C9J2P7 530 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 USP17L13C9JLJ4 530 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 USP17L11C9JVI0 530 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 USP17L18D6R9N7 530 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 USP17L22D6RA61 530 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 USP17L17D6RBQ6 530 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 USP17L19D6RCP7 530 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 USP17L20D6RJB6 530 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 RAD17O75943 681 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 SLU7O95391 586 aaKnown RBP15.14■□□□□ 0.01
SMG6-203ENST00000536871 RPS12P25398 132 aaKnown RBP15.14■□□□□ 0.01
SMG6-203ENST00000536871 CCT6AP40227 531 aaKnown RBP15.14■□□□□ 0.01
SMG6-203ENST00000536871 USP17L24Q0WX57 530 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 USP17L6PQ6QN14 398 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 CYP26C1Q6V0L0 522 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 CCDC65Q8IXS2 484 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 VPS16Q9H269 839 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 TAB2Q9NYJ8 693 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 PRR12Q9ULL5 1215 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 MAPK8IP1Q9UQF2 711 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 MYMKA6NI61 221 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 GYPCP04921 128 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 ASNSP08243 561 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 CASP14P31944 242 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 STK4Q13043 487 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 MCM6Q14566 821 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 FIGNQ5HY92 759 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 FKBP15Q5T1M5 1219 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 CCDC125Q86Z20 511 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 IRF2BP1Q8IU81 584 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 LRRC15Q8TF66 581 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 JDP2Q8WYK2 163 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 ZBED3Q96IU2 234 aaPredicted RBP15.14■□□□□ 0.01
SMG6-203ENST00000536871 NUP88Q99567 741 aaPredicted RBP15.14■□□□□ 0.01
SMG6-203ENST00000536871 VCPKMTQ9H867 229 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
SMG6-203ENST00000536871 MRPL11Q9Y3B7 192 aaKnown RBP15.14■□□□□ 0.01
SMG6-203ENST00000536871 ARFGEF1Q9Y6D6 1849 aa15.14■□□□□ 0.01
SMG6-203ENST00000536871 CNTNAP1P78357 1384 aa15.13■□□□□ 0.01
SMG6-203ENST00000536871 EHHADHQ08426 723 aa15.13■□□□□ 0.01
SMG6-203ENST00000536871 TUBB2AQ13885 445 aa15.13■□□□□ 0.01
SMG6-203ENST00000536871 CIAPIN1Q6FI81 312 aa15.13■□□□□ 0.01
SMG6-203ENST00000536871 ARHGAP27Q6ZUM4 889 aa15.13■□□□□ 0.01
SMG6-203ENST00000536871 ZNF507Q8TCN5 953 aa15.13■□□□□ 0.01
SMG6-203ENST00000536871 DDX12PQ92771 950 aa15.13■□□□□ 0.01
SMG6-203ENST00000536871 DUSP9Q99956 384 aaKnown RBP15.13■□□□□ 0.01
SMG6-203ENST00000536871 TUBGCP2Q9BSJ2 902 aa15.13■□□□□ 0.01
SMG6-203ENST00000536871 TUBB2BQ9BVA1 445 aa15.13■□□□□ 0.01
SMG6-203ENST00000536871 ABHD10Q9NUJ1 306 aa15.13■□□□□ 0.01
SMG6-203ENST00000536871 FEM1BQ9UK73 627 aa15.13■□□□□ 0.01
SMG6-203ENST00000536871 KIF13BQ9NQT8 1826 aa15.13■□□□□ 0.01
SMG6-203ENST00000536871 MUTP22033 750 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 POLD1P28340 1107 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 CAP2P40123 477 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 SYT10Q6XYQ8 523 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 SAMD3Q8N6K7 520 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 OR8K1Q8NGG5 319 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 ANKRD7Q92527 254 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 RANBP17Q9H2T7 1088 aaKnown RBP15.12■□□□□ 0.01
SMG6-203ENST00000536871 LUC7L2Q9Y383 392 aaKnown RBP15.12■□□□□ 0.01
SMG6-203ENST00000536871 A0A1W2PRG0 241 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 CLRN2A0PK11 232 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 TRIM49BA6NDI0 452 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 GNA14O95837 355 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 DALRD3Q5D0E6 543 aaKnown RBP15.12■□□□□ 0.01
SMG6-203ENST00000536871 ANKRD40Q6AI12 368 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 TRIM65Q6PJ69 517 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 CCDC84Q86UT8 332 aaPredicted RBP15.12■□□□□ 0.01
SMG6-203ENST00000536871 KIAA0895Q8NCT3 520 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 ETNPPLQ8TBG4 499 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 CNOT6LQ96LI5 555 aaKnown RBP15.12■□□□□ 0.01
SMG6-203ENST00000536871 DEFB129Q9H1M3 183 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 TAOK3Q9H2K8 898 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 VEZTQ9HBM0 779 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 MYO1AQ9UBC5 1043 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 CAPN11Q9UMQ6 739 aa15.12■□□□□ 0.01
SMG6-203ENST00000536871 A0A1W2PQJ5 194 aa15.11■□□□□ 0.01
SMG6-203ENST00000536871 GCOM1H8Y6P7 765 aaPredicted RBP15.11■□□□□ 0.01
SMG6-203ENST00000536871 POLR2MP0CAP2 368 aa15.11■□□□□ 0.01
SMG6-203ENST00000536871 RPA1P27694 616 aa15.11■□□□□ 0.01
SMG6-203ENST00000536871 MTIF2P46199 727 aaKnown RBP15.11■□□□□ 0.01
SMG6-203ENST00000536871 PMS1P54277 932 aaKnown RBP15.11■□□□□ 0.01
SMG6-203ENST00000536871 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
SMG6-203ENST00000536871 MYOCDQ8IZQ8 938 aa15.11■□□□□ 0.01
SMG6-203ENST00000536871 PDCL2Q8N4E4 241 aa15.11■□□□□ 0.01
SMG6-203ENST00000536871 ZNF397Q8NF99 534 aaPredicted RBP15.11■□□□□ 0.01
SMG6-203ENST00000536871 ERGIC2Q96RQ1 377 aa15.11■□□□□ 0.01
SMG6-203ENST00000536871 ZNHIT6Q9NWK9 470 aaKnown RBP15.11■□□□□ 0.01
SMG6-203ENST00000536871 ADGRG1Q9Y653 693 aa15.11■□□□□ 0.01
SMG6-203ENST00000536871 SLURP2P0DP57 97 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 FCER1AP12319 257 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 IDEP14735 1019 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 KRT9P35527 623 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 ZNF76P36508 570 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 FAM26FQ5R3K3 315 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 CREBRFQ8IUR6 639 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 LPAR1Q92633 364 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 DNAJC7Q99615 494 aa15.1■□□□□ 0.01
SMG6-203ENST00000536871 NOC4LQ9BVI4 516 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms