RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 C17orf99Q6UX52 265 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 FBXO11Q86XK2 927 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 PAGR1Q9BTK6 254 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 TEX13BQ9BXU2 312 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 RANBP17Q9H2T7 1088 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 MORF4L1Q9UBU8 362 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 CPA4Q9UI42 421 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 PCDHA1Q9Y5I3 950 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 PARP14Q460N5 1801 aa12.46□□□□□ -0.41
CCDC90B-218ENST00000533761 BAZ2BQ9UIF8 2168 aaKnown RBP12.46□□□□□ -0.41
CCDC90B-218ENST00000533761 MYH15Q9Y2K3 1946 aa12.46□□□□□ -0.41
CCDC90B-218ENST00000533761 KIF28PB7ZC32 967 aa12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 ICAM1P05362 532 aa12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 STAT3P40763 770 aa12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 ME1P48163 572 aa12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 NASPP49321 788 aaPredicted RBP12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 TMEM132BQ14DG7 1078 aa12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 QRICH1Q2TAL8 776 aa12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 FAM173BQ6P4H8 233 aa12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 CCAR1Q8IX12 1150 aaKnown RBP12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 CPXCR1Q8N123 301 aa12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 USP28Q96RU2 1077 aa12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 NAP1L4Q99733 375 aaKnown RBP12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 PSTPIP2Q9H939 334 aa12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 RCOR1Q9UKL0 485 aa12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 ADGRA2Q96PE1 1338 aa12.46□□□□□ -0.42
CCDC90B-218ENST00000533761 SPTLC2O15270 562 aa12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 BCRP11274 1271 aa12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 ERVK-9P63128 1117 aa12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 ERVK-24P63145 666 aa12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 CEBPZQ03701 1054 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 NR5A1Q13285 461 aa12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 ORC2Q13416 577 aaPredicted RBP12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 NOM1Q5C9Z4 860 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 CCDC174Q6PII3 467 aa12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 REPS2Q8NFH8 660 aa12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 SPATC1LQ9H0A9 340 aa12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 GDPD2Q9HCC8 539 aa12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 RAVER2Q9HCJ3 691 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 TXNRD2Q9NNW7 524 aa12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 RIC8AQ9NPQ8 531 aa12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 BTBD7Q9P203 1132 aa12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 TFIP11Q9UBB9 837 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 ZNF214Q9UL59 606 aaPredicted RBP12.45□□□□□ -0.42
CCDC90B-218ENST00000533761 SMAPO00193 183 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 PPP6R2O75170 966 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 SLC25A27O95847 323 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 COPB2P35606 906 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 SNAP25P60880 206 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 AP3B2Q13367 1082 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 SLC39A14Q15043 492 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 NONOQ15233 471 aaKnown RBP eCLIP12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 SLC35G1Q2M3R5 365 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 SNRNP48Q6IEG0 339 aaKnown RBP12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 PIK3AP1Q6ZUJ8 805 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 LINC00301Q8NCQ3 95 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 R3HDMLQ9H3Y0 253 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 CCPG1Q9ULG6 757 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 MRPL11Q9Y3B7 192 aaKnown RBP12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 MORC2Q9Y6X9 1032 aaPredicted RBP12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 ZNF536O15090 1300 aa12.44□□□□□ -0.42
CCDC90B-218ENST00000533761 LAD1O00515 517 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 CNMDO75829 334 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 FOSP01100 380 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 SP3Q02447 781 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 Q3C1V9 767 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 CCDC73Q6ZRK6 1079 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 RIOX2Q8IUF8 465 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 AGBL1Q96MI9 1066 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 MOV10L1Q9BXT6 1211 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 MROH8Q9H579 483 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 EHMT1Q9H9B1 1298 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 TCHHQ07283 1943 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 ABCB11O95342 1321 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 A0A0G2JMZ2 1700 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 FAM187AA6NFU0 413 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 GPR25O00155 361 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 WFS1O76024 890 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 MAPK4P31152 587 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 KIF22Q14807 665 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 NPY5RQ15761 445 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 TKFCQ3LXA3 575 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 TTC38Q5R3I4 469 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 ADALQ6DHV7 355 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 ZNF598Q86UK7 904 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 NCAPG2Q86XI2 1143 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 SAMD3Q8N6K7 520 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 SHCBP1Q8NEM2 672 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 TNFRSF25Q93038 417 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 COA7Q96BR5 231 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 CCDC34Q96HJ3 373 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 FBXO40Q9UH90 709 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 PCDHA6Q9UN73 950 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 PCDHA8Q9Y5H6 950 aa12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 COL11A1P12107 1806 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-218ENST00000533761 A0A1W2PQ27 194 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 A0A1W2PQ64 194 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 A0A1W2PQD8 194 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 SPDYE3A6NKU9 549 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 PEX10O60683 326 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms