RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 SCRN1Q12765 414 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 AGBL3Q8NEM8 1001 aa12.4□□□□□ -0.42
PTPRK-221ENST00000532331 LBHD1Q9BQE6 289 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-221ENST00000532331 SPATA31D1Q6ZQQ2 1576 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 C19orf81C9J6K1 198 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 ZBTB5O15062 677 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 ARHGAP6O43182 974 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 PRPF3O43395 683 aaKnown RBP12.39□□□□□ -0.43
PTPRK-221ENST00000532331 OATP04181 439 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 GYS1P13807 737 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 GAP43P17677 238 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 PNOCQ13519 176 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 MTMR2Q13614 643 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 CCDC6Q16204 474 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 FAM26FQ5R3K3 315 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 STAG1Q8WVM7 1258 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 MIS12Q9H081 205 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 MTIF3Q9H2K0 278 aaKnown RBP12.39□□□□□ -0.43
PTPRK-221ENST00000532331 RSPH14Q9UHP6 348 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 CCL15-CCL14A0A0B4J2E2 113 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 AP3B2Q13367 1082 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 CCL15Q16663 113 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 CPLX4Q7Z7G2 160 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 LMBRD1Q9NUN5 540 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 PIK3CAP42336 1068 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 NEDD9Q14511 834 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 GTF3C2Q8WUA4 911 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-221ENST00000532331 TCP11Q8WWU5 503 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 ERO1AQ96HE7 468 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 VPS18Q9P253 973 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 UTP11Q9Y3A2 253 aaKnown RBP12.39□□□□□ -0.43
PTPRK-221ENST00000532331 PFKFB1P16118 471 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 CAPN2P17655 700 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 PTPREP23469 700 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 JAK3P52333 1124 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 MTX1Q13505 466 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 MTMR1Q13613 665 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 CATSPER4Q7RTX7 472 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 SYCE1Q8N0S2 351 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 TMEM47Q9BQJ4 181 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 SNX25Q9H3E2 840 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 ARMCX3Q9UH62 379 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-221ENST00000532331 UBN2Q6ZU65 1347 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 F5H6K3 240 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 ENTPD3O75355 529 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 KLRC3Q07444 240 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 SAMD7Q7Z3H4 446 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 GABPB2Q8TAK5 448 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-221ENST00000532331 AK8Q96MA6 479 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 DAGLAQ9Y4D2 1042 aa12.39□□□□□ -0.43
PTPRK-221ENST00000532331 VEGFAP15692 232 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-221ENST00000532331 LACTBP83111 547 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-221ENST00000532331 SKIV2LQ15477 1246 aaKnown RBP12.38□□□□□ -0.43
PTPRK-221ENST00000532331 CLUL1Q15846 466 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 ANKRD13AQ8IZ07 590 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 SLC44A5Q8NCS7 719 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 GCNAQ96QF7 691 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 ACCSQ96QU6 501 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 MAGEF1Q9HAY2 307 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 SRGAP2CP0DJJ0 459 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 EPHX2P34913 555 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 LIFRP42702 1097 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 NBPF11Q86T75 865 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 ZNF280CQ8ND82 737 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 CEP95Q96GE4 821 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 NLRP4Q96MN2 994 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 ADARB2Q9NS39 739 aaKnown RBP12.38□□□□□ -0.43
PTPRK-221ENST00000532331 NKIRAS1Q9NYS0 192 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 SERPINA10Q9UK55 444 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 TYW5A2RUC4 315 aaKnown RBP12.38□□□□□ -0.43
PTPRK-221ENST00000532331 DENND3A2RUS2 1198 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 CCDC121Q6ZUS5 278 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 TRMT44Q8IYL2 757 aaKnown RBP12.38□□□□□ -0.43
PTPRK-221ENST00000532331 HHIPL2Q6UWX4 724 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 LARP4BQ92615 738 aaKnown RBP12.38□□□□□ -0.43
PTPRK-221ENST00000532331 TRIM7Q9C029 511 aa12.38□□□□□ -0.43
PTPRK-221ENST00000532331 METTL14Q9HCE5 456 aaKnown RBP12.38□□□□□ -0.43
PTPRK-221ENST00000532331 COG2Q14746 738 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 CFAP157Q5JU67 520 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 FAM76AQ8TAV0 307 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 TSKSQ9UJT2 592 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 MAP7D1Q3KQU3 841 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 PRAMEF18Q5VWM3 479 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 PI4K2BQ8TCG2 481 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 KIAA1468Q9P260 1216 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 ODF2LQ9ULJ1 636 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 RNASE9P60153 205 aaKnown RBP12.37□□□□□ -0.43
PTPRK-221ENST00000532331 UAP1Q16222 522 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-221ENST00000532331 PPP1R21Q6ZMI0 780 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 FBXO18Q8NFZ0 1043 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 SYMPKQ92797 1274 aaKnown RBP12.37□□□□□ -0.43
PTPRK-221ENST00000532331 OSBPL5Q9H0X9 879 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-221ENST00000532331 SAMD15Q9P1V8 674 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 PCDHA6Q9UN73 950 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 TTLL3Q9Y4R7 772 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 PCDHA8Q9Y5H6 950 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 MYO3AQ8NEV4 1616 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 DNAJC21Q5F1R6 531 aaKnown RBP12.37□□□□□ -0.43
PTPRK-221ENST00000532331 FAM151AQ8WW52 585 aa12.37□□□□□ -0.43
PTPRK-221ENST00000532331 GJA10Q969M2 543 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms