RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.27□□□□□ -0.456e-6■■□□□ 13.9
COPB1-207ENST00000529866 EMSYQ7Z589 1322 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 WDR19Q8NEZ3 1342 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 COL4A4P53420 1690 aaPredicted RBP12.26□□□□□ -0.45
COPB1-207ENST00000529866 LGR5O75473 907 aa12.26□□□□□ -0.45
COPB1-207ENST00000529866 ARIH2O95376 493 aa12.26□□□□□ -0.45
COPB1-207ENST00000529866 TOP1P11387 765 aaKnown RBP12.26□□□□□ -0.45
COPB1-207ENST00000529866 ZP2Q05996 745 aa12.26□□□□□ -0.45
COPB1-207ENST00000529866 TSHZ3Q63HK5 1081 aa12.26□□□□□ -0.45
COPB1-207ENST00000529866 TTBK2Q6IQ55 1244 aa12.26□□□□□ -0.45
COPB1-207ENST00000529866 EP400NLQ6ZTU2 488 aa12.26□□□□□ -0.45
COPB1-207ENST00000529866 MYOCDQ8IZQ8 938 aa12.26□□□□□ -0.45
COPB1-207ENST00000529866 PABPC5Q96DU9 382 aaKnown RBP12.26□□□□□ -0.45
COPB1-207ENST00000529866 C17orf80Q9BSJ5 609 aa12.26□□□□□ -0.45
COPB1-207ENST00000529866 FSD1Q9BTV5 496 aa12.26□□□□□ -0.45
COPB1-207ENST00000529866 FRMPD2Q68DX3 1309 aaPredicted RBP12.26□□□□□ -0.45
COPB1-207ENST00000529866 SCN5AQ14524 2016 aa12.26□□□□□ -0.45
COPB1-207ENST00000529866 POTEB3A0JP26 581 aa12.25□□□□□ -0.45
COPB1-207ENST00000529866 NCK2O43639 380 aa12.25□□□□□ -0.45
COPB1-207ENST00000529866 NOVP48745 357 aa12.25□□□□□ -0.45
COPB1-207ENST00000529866 POTEBQ6S5H4 581 aa12.25□□□□□ -0.45
COPB1-207ENST00000529866 CHST3Q7LGC8 479 aa12.25□□□□□ -0.45
COPB1-207ENST00000529866 ADHFE1Q8IWW8 467 aa12.25□□□□□ -0.45
COPB1-207ENST00000529866 BANK1Q8NDB2 785 aa12.25□□□□□ -0.45
COPB1-207ENST00000529866 KAT2BQ92831 832 aa12.25□□□□□ -0.45
COPB1-207ENST00000529866 POP1Q99575 1024 aaKnown RBP12.25□□□□□ -0.45
COPB1-207ENST00000529866 NSUN3Q9H649 340 aaKnown RBP12.25□□□□□ -0.45
COPB1-207ENST00000529866 GPCPD1Q9NPB8 672 aa12.25□□□□□ -0.45
COPB1-207ENST00000529866 TOMM22Q9NS69 142 aa12.25□□□□□ -0.45
COPB1-207ENST00000529866 TET1Q8NFU7 2136 aa12.25□□□□□ -0.45
COPB1-207ENST00000529866 ORC4O43929 436 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 PSEN2P49810 448 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 CTDSPL2Q05D32 466 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 ARHGAP1Q07960 439 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 MFSD10Q14728 455 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 LY6KQ17RY6 165 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 EPC2Q52LR7 807 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 TCEAL5Q5H9L2 206 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 CCDC62Q6P9F0 684 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 SEPT14Q6ZU15 432 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 DHX37Q8IY37 1157 aaKnown RBP12.24□□□□□ -0.45
COPB1-207ENST00000529866 RGS22Q8NE09 1264 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
COPB1-207ENST00000529866 NSUN6Q8TEA1 469 aaKnown RBP12.24□□□□□ -0.45
COPB1-207ENST00000529866 YME1L1Q96TA2 773 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 SEC62Q99442 399 aaKnown RBP12.24□□□□□ -0.45
COPB1-207ENST00000529866 MAF1Q9H063 256 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 HDAC6Q9UBN7 1215 aa12.24□□□□□ -0.45
COPB1-207ENST00000529866 H3BNC9 293 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 F2P00734 622 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 PDHBP11177 359 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 HTRA4P83105 476 aaPredicted RBP12.23□□□□□ -0.45
COPB1-207ENST00000529866 ZNF543Q08ER8 600 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 GPM6BQ13491 265 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 STXBP2Q15833 593 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 KIAA0753Q2KHM9 967 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 TCTN1Q2MV58 587 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 USH1GQ495M9 461 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 ZMYM1Q5SVZ6 1142 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 ZNF618Q5T7W0 954 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.23□□□□□ -0.456e-8■■□□□ 11.4
COPB1-207ENST00000529866 HFE2Q6ZVN8 426 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 PPTC7Q8NI37 304 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 EMID1Q96A84 441 aaPredicted RBP12.23□□□□□ -0.45
COPB1-207ENST00000529866 TMEM47Q9BQJ4 181 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 ALG1Q9BT22 464 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 CLDND1Q9NY35 253 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 ANAPC4Q9UJX5 808 aa12.23□□□□□ -0.45
COPB1-207ENST00000529866 TTC41PQ6P2S7 1318 aa12.22□□□□□ -0.45
COPB1-207ENST00000529866 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
COPB1-207ENST00000529866 LAMC2Q13753 1193 aa12.22□□□□□ -0.45
COPB1-207ENST00000529866 COL19A1Q14993 1142 aa12.22□□□□□ -0.45
COPB1-207ENST00000529866 TRIM71Q2Q1W2 868 aaKnown RBP12.22□□□□□ -0.45
COPB1-207ENST00000529866 RRP12Q5JTH9 1297 aaKnown RBP12.22□□□□□ -0.45
COPB1-207ENST00000529866 TRAF7Q6Q0C0 670 aa12.22□□□□□ -0.45
COPB1-207ENST00000529866 FBXO11Q86XK2 927 aa12.22□□□□□ -0.45
COPB1-207ENST00000529866 MCF2L2Q86YR7 1114 aa12.22□□□□□ -0.45
COPB1-207ENST00000529866 DBF4BQ8NFT6 615 aa12.22□□□□□ -0.45
COPB1-207ENST00000529866 SEPT8Q92599 483 aa12.22□□□□□ -0.45
COPB1-207ENST00000529866 IWS1Q96ST2 819 aa12.22□□□□□ -0.45
COPB1-207ENST00000529866 MRVI1Q9Y6F6 885 aa12.22□□□□□ -0.45
COPB1-207ENST00000529866 LCTP09848 1927 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 CACNA1HO95180 2353 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 WDFY4Q6ZS81 3184 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 ABCB11O95342 1321 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 RSPH10B2B2RC85 870 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 RSPH10BP0C881 870 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 ZNF286BP0CG31 522 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 THPOP40225 353 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 PTPN5P54829 565 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 MBTPS1Q14703 1052 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 GPATCH4Q5T3I0 446 aaKnown RBP12.21□□□□□ -0.45
COPB1-207ENST00000529866 POTEDQ86YR6 584 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 TMEM192Q8IY95 271 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 RMDN3Q96TC7 470 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 PRRX2Q99811 253 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 INCENPQ9NQS7 918 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 TCP11L1Q9NUJ3 509 aa12.21□□□□□ -0.45
COPB1-207ENST00000529866 ZDBF2Q9HCK1 2354 aa12.21□□□□□ -0.46
COPB1-207ENST00000529866 ZNF318Q5VUA4 2279 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms