RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CD3EP07766 207 aa6.32□□□□□ -1.4
CSDE1-211ENST00000525970 CELA3BP08861 270 aa6.32□□□□□ -1.4
CSDE1-211ENST00000525970 STAT3P40763 770 aa6.32□□□□□ -1.4
CSDE1-211ENST00000525970 CEBPAP49715 358 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-211ENST00000525970 KIR3DS1Q14943 382 aa6.32□□□□□ -1.4
CSDE1-211ENST00000525970 NR1I3Q14994 352 aa6.32□□□□□ -1.4
CSDE1-211ENST00000525970 SKOR2Q2VWA4 1001 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-211ENST00000525970 CCDC181Q5TID7 509 aa6.32□□□□□ -1.4
CSDE1-211ENST00000525970 NIM1KQ8IY84 436 aa6.32□□□□□ -1.4
CSDE1-211ENST00000525970 ZNF513Q8N8E2 541 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-211ENST00000525970 NUP43Q8NFH3 380 aa6.32□□□□□ -1.4
CSDE1-211ENST00000525970 FEZF2Q8TBJ5 459 aa6.32□□□□□ -1.4
CSDE1-211ENST00000525970 SLC12A9Q9BXP2 914 aa6.32□□□□□ -1.4
CSDE1-211ENST00000525970 ARHGEF4Q9NR80 690 aa6.32□□□□□ -1.4
CSDE1-211ENST00000525970 VAMP4O75379 141 aa6.31□□□□□ -1.4
CSDE1-211ENST00000525970 PABPC4Q13310 644 aaKnown RBP eCLIP6.31□□□□□ -1.4
CSDE1-211ENST00000525970 C21orf62-AS1Q17RA5 79 aa6.31□□□□□ -1.4
CSDE1-211ENST00000525970 DPY19L1Q2PZI1 675 aa6.31□□□□□ -1.4
CSDE1-211ENST00000525970 SV2CQ496J9 727 aa6.31□□□□□ -1.4
CSDE1-211ENST00000525970 JAMLQ86YT9 394 aa6.31□□□□□ -1.4
CSDE1-211ENST00000525970 PRPF38AQ8NAV1 312 aaKnown RBP6.31□□□□□ -1.4
CSDE1-211ENST00000525970 BORCS6Q96GS4 357 aa6.31□□□□□ -1.4
CSDE1-211ENST00000525970 PWWP2AQ96N64 755 aa6.31□□□□□ -1.4
CSDE1-211ENST00000525970 FCRL3Q96P31 734 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-211ENST00000525970 IER2Q9BTL4 223 aa6.31□□□□□ -1.4
CSDE1-211ENST00000525970 NCOA5Q9HCD5 579 aaKnown RBP6.31□□□□□ -1.4
CSDE1-211ENST00000525970 CHPF2Q9P2E5 772 aa6.31□□□□□ -1.4
CSDE1-211ENST00000525970 LRP2BPQ9P2M1 347 aa6.31□□□□□ -1.4
CSDE1-211ENST00000525970 APEX2Q9UBZ4 518 aa6.31□□□□□ -1.4
CSDE1-211ENST00000525970 CGGBP1Q9UFW8 167 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-211ENST00000525970 AKT3Q9Y243 479 aa6.31□□□□□ -1.4
CSDE1-211ENST00000525970 IRS2Q9Y4H2 1338 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 NUDT19A8MXV4 375 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 NOP56O00567 594 aaKnown RBP6.3□□□□□ -1.4
CSDE1-211ENST00000525970 PLD2O14939 933 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 MAPKAPK2P49137 400 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 CDKN1CP49918 316 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-211ENST00000525970 AMPD2Q01433 879 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 FNDC3BQ53EP0 1204 aaKnown RBP6.3□□□□□ -1.4
CSDE1-211ENST00000525970 RTP2Q5QGT7 225 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 RPTNQ6XPR3 784 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 FRMD5Q7Z6J6 570 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 PRRT2Q7Z6L0 340 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-211ENST00000525970 RNF180Q86T96 592 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 DHX37Q8IY37 1157 aaKnown RBP6.3□□□□□ -1.4
CSDE1-211ENST00000525970 ARHGEF39Q8N4T4 335 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 BVESQ8NE79 360 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 RCC1LQ96I51 464 aaKnown RBP6.3□□□□□ -1.4
CSDE1-211ENST00000525970 JMJD8Q96S16 334 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 IMPACTQ9P2X3 320 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 ATP8A1Q9Y2Q0 1164 aa6.3□□□□□ -1.4
CSDE1-211ENST00000525970 GSG1L2A8MUP6 293 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 BUB1BO60566 1050 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-211ENST00000525970 KCNH1O95259 989 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 S100BP04271 92 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-211ENST00000525970 IFNGR1P15260 489 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 PFKLP17858 780 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 L1CAMP32004 1257 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 VMACQ2NL98 169 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 PLEKHN1Q494U1 663 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-211ENST00000525970 HLA-DQA1Q5Y7H0 255 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 POMZP3Q6PJE2 187 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 ZC3H14Q6PJT7 736 aaKnown RBP6.29□□□□□ -1.4
CSDE1-211ENST00000525970 CRACR2BQ8N4Y2 399 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-211ENST00000525970 TMEM52Q8NDY8 209 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 CHAC2Q8WUX2 184 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 CLUHP3Q96NS8 147 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 DHRS4Q9BTZ2 278 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 CAAP1Q9H8G2 361 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 MRPS23Q9Y3D9 190 aaKnown RBP6.29□□□□□ -1.4
CSDE1-211ENST00000525970 ADAMTS20P59510 1910 aa6.29□□□□□ -1.4
CSDE1-211ENST00000525970 FAM83GA6ND36 823 aa6.28□□□□□ -1.4
CSDE1-211ENST00000525970 STXBP3O00186 592 aa6.28□□□□□ -1.4
CSDE1-211ENST00000525970 SRGAP3O43295 1099 aa6.28□□□□□ -1.4
CSDE1-211ENST00000525970 MYCLP1P12525 358 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-211ENST00000525970 IGFBP6P24592 240 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-211ENST00000525970 TARBP2Q15633 366 aaKnown RBP6.28□□□□□ -1.4
CSDE1-211ENST00000525970 FAM209AQ5JX71 171 aa6.28□□□□□ -1.4
CSDE1-211ENST00000525970 YOD1Q5VVQ6 348 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-211ENST00000525970 CYP2R1Q6VVX0 501 aa6.28□□□□□ -1.4
CSDE1-211ENST00000525970 ZDHHC14Q8IZN3 488 aa6.28□□□□□ -1.4
CSDE1-211ENST00000525970 TP53I13Q8NBR0 393 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-211ENST00000525970 LGR4Q9BXB1 951 aa6.28□□□□□ -1.4
CSDE1-211ENST00000525970 HOMER2Q9NSB8 354 aa6.28□□□□□ -1.4
CSDE1-211ENST00000525970 FAN1Q9Y2M0 1017 aa6.28□□□□□ -1.4
CSDE1-211ENST00000525970 EMC9Q9Y3B6 208 aa6.28□□□□□ -1.4
CSDE1-211ENST00000525970 TRAV20A0A0B4J274 112 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 A0A1W2PQ27 194 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 A0A1W2PQ64 194 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 A0A1W2PQC6 194 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 A0A1W2PQD8 194 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 AURKAO14965 403 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 TBC1D8O95759 1140 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 CYBBP04839 570 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 ADRB1P08588 477 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 SEPHS1P49903 392 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 MVKQ03426 396 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 GRB10Q13322 594 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 DDX42Q86XP3 938 aaKnown RBP eCLIP6.27□□□□□ -1.41
CSDE1-211ENST00000525970 SCUBE1Q8IWY4 988 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms