RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TXLNAP40222 546 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 ZNF143P52747 638 aaPredicted RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 KRT76Q01546 638 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 SLC7A5Q01650 507 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 CENPCQ03188 943 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 ZNF267Q14586 743 aaPredicted RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 PSMD6Q15008 389 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 SART3Q15020 963 aaKnown RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 LLGL1Q15334 1064 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 TTC31Q49AM3 519 aaPredicted RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 CCDC38Q502W7 563 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 RASIP1Q5U651 963 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 TMCO3Q6UWJ1 677 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 CCDC149Q6ZUS6 474 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 NEK10Q6ZWH5 1172 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 CCDC155Q8N6L0 562 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 C7orf31Q8N865 590 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 TMEM102Q8N9M5 508 aaPredicted RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 ZBTB34Q8NCN2 500 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 SMC1BQ8NDV3 1235 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 ZSCAN18Q8TBC5 510 aaPredicted RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 CENPIQ92674 756 aaPredicted RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 FERMT2Q96AC1 680 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 TRIM44Q96DX7 344 aaPredicted RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 WNK4Q96J92 1243 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 SUSD3Q96L08 255 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 ABCG4Q9H172 646 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 ATP8A2Q9NTI2 1148 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 ARGLU1Q9NWB6 273 aaPredicted RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 MKS1Q9NXB0 559 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 IFT80Q9P2H3 777 aaPredicted RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 EPS15L1Q9UBC2 864 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 STAP2Q9UGK3 403 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 XPO7Q9UIA9 1087 aaKnown RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 CYP8B1Q9UNU6 501 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 PA2G4Q9UQ80 394 aaKnown RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 POLHQ9Y253 713 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 PCDHGB6Q9Y5F9 930 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.19□□□□□ -1.58
CD44-213ENST00000525209 CUX2O14529 1486 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 A0A087WV62 115 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 TCRBV16S1A1N1A0A5B0 115 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 ZNF891A8MT65 544 aaPredicted RBP5.18□□□□□ -1.58
CD44-213ENST00000525209 B4E1Z4 1266 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 MASP2O00187 686 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 PRODHO43272 600 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 FRS3O43559 492 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 CAPNS1P04632 268 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 DHRS4L1P0CG22 281 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 MYBP10242 640 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 BMP6P22004 513 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 IL2P60568 153 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 RPL6Q02878 288 aaKnown RBP5.18□□□□□ -1.58
CD44-213ENST00000525209 PPP2R5CQ13362 524 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 PKN2Q16513 984 aaKnown RBP5.18□□□□□ -1.58
CD44-213ENST00000525209 ATAT1Q5SQI0 421 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 HECTD3Q5T447 861 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 PIK3R6Q5UE93 754 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 RTL10Q7L3V2 364 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 DAAM2Q86T65 1068 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 PTRH1Q86Y79 214 aaKnown RBP5.18□□□□□ -1.58
CD44-213ENST00000525209 ERC1Q8IUD2 1116 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 EGFL6Q8IUX8 553 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 MAP4K3Q8IVH8 894 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 PCYOX1LQ8NBM8 494 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 ZNF280CQ8ND82 737 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 OR8H1Q8NGG4 311 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 RNF217Q8TC41 542 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 RHPN1Q8TCX5 695 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 SNX21Q969T3 373 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 HIC2Q96JB3 615 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 ACO2Q99798 780 aaKnown RBP5.18□□□□□ -1.58
CD44-213ENST00000525209 NIFKQ9BYG3 293 aaKnown RBP5.18□□□□□ -1.58
CD44-213ENST00000525209 RTEL1Q9NZ71 1219 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 GPRC5BQ9NZH0 403 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 MARK1Q9P0L2 795 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 CDC23Q9UJX2 597 aa5.18□□□□□ -1.58
CD44-213ENST00000525209 CDC14CA4D256 554 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 SLC35F4A4IF30 521 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 TSPY2A6NKD2 308 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 EIF3FO00303 357 aaPredicted RBP5.17□□□□□ -1.58
CD44-213ENST00000525209 CPLX1O14810 134 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 HTATSF1O43719 755 aaKnown RBP5.17□□□□□ -1.58
CD44-213ENST00000525209 SLITRK5O94991 958 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 TBC1D8O95759 1140 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 TSPY3P0CV98 308 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 TSPY8P0CW00 308 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 NAT2P11245 290 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 MTHFD1P11586 935 aaKnown RBP5.17□□□□□ -1.58
CD44-213ENST00000525209 NME1P15531 152 aaKnown RBP5.17□□□□□ -1.58
CD44-213ENST00000525209 ATF7P17544 494 aaPredicted RBP5.17□□□□□ -1.58
CD44-213ENST00000525209 ABCB4P21439 1286 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 GRK2P25098 689 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 STAT1P42224 750 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 PTGIRP43119 386 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 GRIA4P48058 902 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 MAN2A2P49641 1150 aa5.17□□□□□ -1.58
CD44-213ENST00000525209 CLNS1AP54105 237 aaKnown RBP5.17□□□□□ -1.58
CD44-213ENST00000525209 ATXN1P54253 815 aaKnown RBP5.17□□□□□ -1.58
CD44-213ENST00000525209 TSPY1Q01534 308 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms