RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 TSPY3P0CV98 308 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 TSPY8P0CW00 308 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 RASSF7Q02833 373 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 GFPT1Q06210 699 aaPredicted RBP12.73□□□□□ -0.37
PTPRK-217ENST00000524534 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 FOXR2Q6PJQ5 311 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 MMS22LQ6ZRQ5 1243 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 IFT20Q8IY31 132 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 IQCKQ8N0W5 287 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 ANKRD13CQ8N6S4 541 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 PNMA5Q96PV4 448 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 STK17AQ9UEE5 414 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 KLRF2D3W0D1 207 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 GLI1P08151 1106 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 GUCY2CP25092 1073 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 GNA11P29992 359 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 HOXA7P31268 230 aaPredicted RBP12.73□□□□□ -0.37
PTPRK-217ENST00000524534 SLC1A4P43007 532 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 SLC10A5Q5PT55 438 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 EMC10Q5UCC4 262 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 MTMR9Q96QG7 549 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 C6orf50Q9HD87 102 aa12.73□□□□□ -0.37
PTPRK-217ENST00000524534 ATXN2Q99700 1313 aaKnown RBP12.72□□□□□ -0.37
PTPRK-217ENST00000524534 GOLGA8HP0CJ92 632 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 LIG3P49916 1009 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 APBA1Q02410 837 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 EHHADHQ08426 723 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 KCNMA1Q12791 1236 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 TTC19Q6DKK2 380 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-217ENST00000524534 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 MREGQ8N565 214 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 TBCKQ8TEA7 893 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 KAT2BQ92831 832 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 MS4A14Q96JA4 679 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 BUB1O43683 1085 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 CARSP49589 748 aaKnown RBP12.72□□□□□ -0.37
PTPRK-217ENST00000524534 RPS8P62241 208 aaKnown RBP12.72□□□□□ -0.37
PTPRK-217ENST00000524534 SPTY2D1Q68D10 685 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-217ENST00000524534 KDM7AQ6ZMT4 941 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 DZIP1Q86YF9 867 aaKnown RBP12.72□□□□□ -0.37
PTPRK-217ENST00000524534 CD302Q8IX05 232 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 ZNF444Q8N0Y2 327 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-217ENST00000524534 LARP4BQ92615 738 aaKnown RBP12.72□□□□□ -0.37
PTPRK-217ENST00000524534 SYN2Q92777 582 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-217ENST00000524534 RABEP2Q9H5N1 569 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 YY1AP1Q9H869 796 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 MTMR7Q9Y216 660 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 MYH10P35580 1976 aa12.72□□□□□ -0.37
PTPRK-217ENST00000524534 ZNF233A6NK53 670 aa12.71□□□□□ -0.37
PTPRK-217ENST00000524534 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.373e-7■□□□□ 8.5
PTPRK-217ENST00000524534 ATP2B2Q01814 1243 aa12.71□□□□□ -0.37
PTPRK-217ENST00000524534 PAK2Q13177 524 aa12.71□□□□□ -0.37
PTPRK-217ENST00000524534 PDCLQ13371 301 aa12.71□□□□□ -0.37
PTPRK-217ENST00000524534 CACNA2D4Q7Z3S7 1137 aa12.71□□□□□ -0.37
PTPRK-217ENST00000524534 GPIHBP1Q8IV16 184 aa12.71□□□□□ -0.37
PTPRK-217ENST00000524534 SH3RF3Q8TEJ3 882 aaPredicted RBP12.71□□□□□ -0.37
PTPRK-217ENST00000524534 PIK3R5Q8WYR1 880 aa12.71□□□□□ -0.37
PTPRK-217ENST00000524534 ANKRD2Q9GZV1 360 aa12.71□□□□□ -0.37
PTPRK-217ENST00000524534 CPVLQ9H3G5 476 aa12.71□□□□□ -0.37
PTPRK-217ENST00000524534 RIC8AQ9NPQ8 531 aa12.71□□□□□ -0.37
PTPRK-217ENST00000524534 NFU1Q9UMS0 254 aa12.71□□□□□ -0.37
PTPRK-217ENST00000524534 STX8Q9UNK0 236 aa12.71□□□□□ -0.37
PTPRK-217ENST00000524534 GRID2IPA4D2P6 1211 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 ZEB2O60315 1214 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 KRT14P02533 472 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 FAM153BP0C7A2 387 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 RASA1P20936 1047 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 TXKP42681 527 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 PSMD2Q13200 908 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 FAM153CQ494X1 144 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 CFAP58Q5T655 872 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 B4GALNT4Q76KP1 1039 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 DYMQ7RTS9 669 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 PROM2Q8N271 834 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 SH2D3CQ8N5H7 860 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 SLC44A5Q8NCS7 719 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 C1orf131Q8NDD1 294 aaKnown RBP12.71□□□□□ -0.38
PTPRK-217ENST00000524534 RAD54LQ92698 747 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 CCDC43Q96MW1 224 aaKnown RBP12.71□□□□□ -0.38
PTPRK-217ENST00000524534 NUCKS1Q9H1E3 243 aaKnown RBP12.71□□□□□ -0.38
PTPRK-217ENST00000524534 CEP72Q9P209 647 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 FAM153AQ9UHL3 310 aa12.71□□□□□ -0.38
PTPRK-217ENST00000524534 COL14A1Q05707 1796 aaKnown RBP12.7□□□□□ -0.38
PTPRK-217ENST00000524534 IRS2Q9Y4H2 1338 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 CCDC88AQ3V6T2 1871 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 TLR2O60603 784 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 NOL4O94818 638 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 HEXIM1O94992 359 aaKnown RBP12.7□□□□□ -0.38
PTPRK-217ENST00000524534 SERPING1P05155 500 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 SMARCA1P28370 1054 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 NAB2Q15742 525 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 SLC9C1Q4G0N8 1177 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 TXNRD3Q86VQ6 643 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 EPB41L5Q9HCM4 733 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 JAG2Q9Y219 1238 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 SAMM50Q9Y512 469 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 ESYT2A0FGR8 921 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 NDUFAB1O14561 156 aa12.7□□□□□ -0.38
PTPRK-217ENST00000524534 PALMO75781 387 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms