RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 ALAS1P13196 640 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 SLC16A2P36021 539 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 STAT2P52630 851 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 PPIGQ13427 754 aaKnown RBP eCLIP13.15□□□□□ -0.3
CSMD1-210ENST00000521646 STAG1Q8WVM7 1258 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 HERVK_113Q902F9 699 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 EMID1Q96A84 441 aaPredicted RBP13.15□□□□□ -0.3
CSMD1-210ENST00000521646 SCLYQ96I15 445 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 TRERF1Q96PN7 1200 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 IL23AQ9NPF7 189 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 SYNPO2Q9UMS6 1093 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 TET1Q8NFU7 2136 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 NCOR1O75376 2440 aa13.14□□□□□ -0.31
CSMD1-210ENST00000521646 EPOPA6NHQ4 379 aa13.14□□□□□ -0.31
CSMD1-210ENST00000521646 DYNC1LI2O43237 492 aaPredicted RBP13.14□□□□□ -0.31
CSMD1-210ENST00000521646 SLC1A4P43007 532 aa13.14□□□□□ -0.31
CSMD1-210ENST00000521646 ITGA7Q13683 1181 aa13.14□□□□□ -0.31
CSMD1-210ENST00000521646 CCDC85BQ15834 202 aaPredicted RBP13.14□□□□□ -0.31
CSMD1-210ENST00000521646 FSCN1Q16658 493 aaKnown RBP13.14□□□□□ -0.31
CSMD1-210ENST00000521646 OTOP2Q7RTS6 562 aa13.14□□□□□ -0.31
CSMD1-210ENST00000521646 PCSK9Q8NBP7 692 aaKnown RBP13.14□□□□□ -0.31
CSMD1-210ENST00000521646 MORC4Q8TE76 937 aa13.14□□□□□ -0.31
CSMD1-210ENST00000521646 VTI1AQ96AJ9 217 aa13.14□□□□□ -0.31
CSMD1-210ENST00000521646 NECAB3Q96P71 396 aaPredicted RBP13.14□□□□□ -0.31
CSMD1-210ENST00000521646 TRMT13Q9NUP7 481 aaKnown RBP13.14□□□□□ -0.31
CSMD1-210ENST00000521646 FBXO40Q9UH90 709 aa13.14□□□□□ -0.31
CSMD1-210ENST00000521646 MTMR7Q9Y216 660 aa13.14□□□□□ -0.31
CSMD1-210ENST00000521646 FCF1Q9Y324 198 aaKnown RBP13.14□□□□□ -0.31
CSMD1-210ENST00000521646 SCN10AQ9Y5Y9 1956 aa13.13□□□□□ -0.31
CSMD1-210ENST00000521646 RFXAPO00287 272 aa13.13□□□□□ -0.31
CSMD1-210ENST00000521646 ZFYP08048 801 aaPredicted RBP13.13□□□□□ -0.31
CSMD1-210ENST00000521646 CYP2C9P11712 490 aa13.13□□□□□ -0.31
CSMD1-210ENST00000521646 GNAT2P19087 354 aa13.13□□□□□ -0.31
CSMD1-210ENST00000521646 GUCA2AQ02747 115 aa13.13□□□□□ -0.31
CSMD1-210ENST00000521646 TTLL4Q14679 1199 aa13.13□□□□□ -0.31
CSMD1-210ENST00000521646 PLA2G2CQ5R387 149 aa13.13□□□□□ -0.31
CSMD1-210ENST00000521646 SLC30A10Q6XR72 485 aa13.13□□□□□ -0.31
CSMD1-210ENST00000521646 ZNF598Q86UK7 904 aaKnown RBP13.13□□□□□ -0.31
CSMD1-210ENST00000521646 CLEC4DQ8WXI8 215 aa13.13□□□□□ -0.31
CSMD1-210ENST00000521646 HIPK3Q9H422 1215 aa13.13□□□□□ -0.31
CSMD1-210ENST00000521646 PRDM9Q9NQV7 894 aa13.13□□□□□ -0.31
CSMD1-210ENST00000521646 MROH7Q68CQ1 1323 aa13.13□□□□□ -0.31
CSMD1-210ENST00000521646 FRMPD2Q68DX3 1309 aaPredicted RBP13.13□□□□□ -0.31
CSMD1-210ENST00000521646 PRRC2BQ5JSZ5 2229 aaKnown RBP13.12□□□□□ -0.31
CSMD1-210ENST00000521646 PLA2G6O60733 806 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 FGRP09769 529 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 BAATQ14032 418 aaPredicted RBP13.12□□□□□ -0.31
CSMD1-210ENST00000521646 KRT40Q6A162 431 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 RCSD1Q6JBY9 416 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 ZNF589Q86UQ0 364 aaPredicted RBP13.12□□□□□ -0.31
CSMD1-210ENST00000521646 TMEM199Q8N511 208 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 COPS5Q92905 334 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 FAM227BQ96M60 508 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 CTAGE1Q96RT6 745 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 USB1Q9BQ65 265 aaKnown RBP13.12□□□□□ -0.31
CSMD1-210ENST00000521646 FSD1Q9BTV5 496 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 NAPBQ9H115 298 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 ALDH8A1Q9H2A2 487 aaPredicted RBP13.12□□□□□ -0.31
CSMD1-210ENST00000521646 RANBP17Q9H2T7 1088 aaKnown RBP13.12□□□□□ -0.31
CSMD1-210ENST00000521646 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 STX8Q9UNK0 236 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 TCF20Q9UGU0 1960 aaKnown RBP13.12□□□□□ -0.31
CSMD1-210ENST00000521646 TTC41PQ6P2S7 1318 aa13.12□□□□□ -0.31
CSMD1-210ENST00000521646 A0A0D9SFI3 127 aa13.11□□□□□ -0.31
CSMD1-210ENST00000521646 ARIH2O95376 493 aa13.11□□□□□ -0.31
CSMD1-210ENST00000521646 TFF2Q03403 129 aa13.11□□□□□ -0.31
CSMD1-210ENST00000521646 GPNMBQ14956 572 aa13.11□□□□□ -0.31
CSMD1-210ENST00000521646 TCTN1Q2MV58 587 aa13.11□□□□□ -0.31
CSMD1-210ENST00000521646 MSS51Q4VC12 460 aa13.11□□□□□ -0.31
CSMD1-210ENST00000521646 PSRC1Q6PGN9 363 aaPredicted RBP13.11□□□□□ -0.31
CSMD1-210ENST00000521646 NSMFQ6X4W1 530 aa13.11□□□□□ -0.31
CSMD1-210ENST00000521646 NOL8Q76FK4 1167 aaKnown RBP13.11□□□□□ -0.31
CSMD1-210ENST00000521646 FAM160B2Q86V87 743 aa13.11□□□□□ -0.31
CSMD1-210ENST00000521646 SLC24A3Q9HC58 644 aa13.11□□□□□ -0.31
CSMD1-210ENST00000521646 ISY1Q9ULR0 285 aaKnown RBP13.11□□□□□ -0.31
CSMD1-210ENST00000521646 TANC1Q9C0D5 1861 aa13.1□□□□□ -0.31
CSMD1-210ENST00000521646 NRG2O14511 850 aaPredicted RBP13.1□□□□□ -0.31
CSMD1-210ENST00000521646 ICAM1P05362 532 aa13.1□□□□□ -0.31
CSMD1-210ENST00000521646 MX1P20591 662 aa13.1□□□□□ -0.31
CSMD1-210ENST00000521646 ALDH5A1P51649 535 aaPredicted RBP13.1□□□□□ -0.31
CSMD1-210ENST00000521646 PURAQ00577 322 aaKnown RBP13.1□□□□□ -0.31
CSMD1-210ENST00000521646 PDE4BQ07343 736 aa13.1□□□□□ -0.31
CSMD1-210ENST00000521646 AKNAD1Q5T1N1 836 aa13.1□□□□□ -0.31
CSMD1-210ENST00000521646 BTNL9Q6UXG8 535 aa13.1□□□□□ -0.31
CSMD1-210ENST00000521646 CHURC1Q8WUH1 139 aa13.1□□□□□ -0.31
CSMD1-210ENST00000521646 TMEM47Q9BQJ4 181 aa13.1□□□□□ -0.31
CSMD1-210ENST00000521646 ANAPC4Q9UJX5 808 aa13.1□□□□□ -0.31
CSMD1-210ENST00000521646 CCPG1Q9ULG6 757 aa13.1□□□□□ -0.31
CSMD1-210ENST00000521646 CTDP1Q9Y5B0 961 aaPredicted RBP13.1□□□□□ -0.31
CSMD1-210ENST00000521646 RBM47A0AV96 593 aaKnown RBP13.09□□□□□ -0.31
CSMD1-210ENST00000521646 ASB14A6NK59 587 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 TSPY2A6NKD2 308 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 TNFRSF10AO00220 468 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 ORC4O43929 436 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 FGBP02675 491 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 IKQ13123 557 aaPredicted RBP13.09□□□□□ -0.31
CSMD1-210ENST00000521646 TKFCQ3LXA3 575 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 DUSP28Q4G0W2 176 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 KIAA1211Q6ZU35 1233 aa13.09□□□□□ -0.31
CSMD1-210ENST00000521646 TMCO2Q7Z6W1 182 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms