RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 AMY2AP04746 511 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 CEACAM5P06731 702 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 GSTM1P09488 218 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 AMY2BP19961 511 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 CLCN7P51798 805 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 EPHB1P54762 984 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 PAK1Q13153 545 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 TMEM177Q53S58 311 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 CDKAL1Q5VV42 579 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 CWF19L1Q69YN2 538 aaKnown RBP4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 FSTL4Q6MZW2 842 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 RNF111Q6ZNA4 994 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 NOL8Q76FK4 1167 aaKnown RBP4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 C16orf59Q7L2K0 433 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 VSIG10LQ86VR7 867 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 SPATS2Q86XZ4 545 aaKnown RBP4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 UBE2FQ969M7 185 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 RTFDC1Q9BY42 306 aaPredicted RBP4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 IPPKQ9H8X2 491 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 PAK6Q9NQU5 681 aaPredicted RBP4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 GPATCH2Q9NW75 528 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 ERVK13-1Q9NX77 482 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 PCDHA11Q9Y5I1 949 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 SNX11Q9Y5W9 270 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 SHTN1A0MZ66 631 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 GNAT3A8MTJ3 354 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 NOTOA8MTQ0 251 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 H3BS24 57 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 FKBP9O95302 570 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 SOD2P04179 222 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 NAT1P18440 290 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 PAMP19021 973 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 SEPHS1P49903 392 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 RAB27AP51159 221 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 NEK2P51955 445 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 CLEC16AQ2KHT3 1053 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 UBE2R2Q712K3 238 aaPredicted RBP4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 FKBP9P1Q75LS8 142 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 CPNE8Q86YQ8 564 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 TP53INP2Q8IXH6 220 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 PLD6Q8N2A8 252 aaKnown RBP4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 SH3RF2Q8TEC5 729 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 LINC01599Q8WXQ3 324 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 SLC39A13Q96H72 371 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 C8orf48Q96LL4 319 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 TTC1Q99614 292 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 MENTQ9BUN1 341 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 ASCC2Q9H1I8 757 aaPredicted RBP4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 TRIT1Q9H3H1 467 aaKnown RBP4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 SMURF1Q9HCE7 757 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 LRRC4CQ9HCJ2 640 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 EMC7Q9NPA0 242 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 SPTLC3Q9NUV7 552 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 ZSWIM5Q9P217 1185 aa4.74□□□□□ -1.65
HMGN1P28-201ENST00000521340 NPHP3-ACAD11A0A0J9YXS1 232 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 FAM155AB1AL88 458 aaPredicted RBP4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 ZNF561-AS1K7EIQ3 104 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 ABLIM3O94929 683 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 EFEMP2O95967 443 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 ITGB5P18084 799 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 FLT3P36888 993 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 BCL6P41182 706 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 LSSP48449 732 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 PCBP3P57721 371 aaKnown RBP4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 KIZQ2M2Z5 673 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 SYDE2Q5VT97 1194 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 DUSP27Q5VZP5 1158 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 OGFOD2Q6N063 350 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 TMPRSS7Q7RTY8 843 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 DDX53Q86TM3 631 aaKnown RBP4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 MTDHQ86UE4 582 aaKnown RBP4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 CNTD1Q8N815 330 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 CHST14Q8NCH0 376 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 NLGN2Q8NFZ4 835 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 OR2W6PQ8NHA6 318 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 PLEKHO2Q8TD55 490 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 CHTF18Q8WVB6 975 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 CAMKK2Q96RR4 588 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 MTA3Q9BTC8 594 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 CDH19Q9H159 772 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 ATP13A1Q9HD20 1204 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 H2AFY2Q9P0M6 372 aaPredicted RBP4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 FBLN5Q9UBX5 448 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 TRHDEQ9UKU6 1024 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 APOBEC2Q9Y235 224 aaKnown RBP4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 PCDHA2Q9Y5H9 948 aa4.73□□□□□ -1.65
HMGN1P28-201ENST00000521340 CCDC66A2RUB6 948 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 FADS2P1A8MWK0 482 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 MAP4K4O95819 1239 aaPredicted RBP4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 SRGAP2CP0DJJ0 459 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 PYGMP11217 842 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 CPEP16870 476 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 SCNN1BP51168 640 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 LSAMPQ13449 338 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 FZD5Q13467 585 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 WWC2Q6AWC2 1192 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 SPRED2Q7Z698 418 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 FLCNQ8NFG4 579 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 FBXW5Q969U6 566 aa4.72□□□□□ -1.65
HMGN1P28-201ENST00000521340 CEP89Q96ST8 783 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms