RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 CKBP12277 381 aa19.23■□□□□ 0.67
TRAM1-204ENST00000521049 NT5C2P49902 561 aa19.23■□□□□ 0.67
TRAM1-204ENST00000521049 DGKDQ16760 1214 aa19.23■□□□□ 0.67
TRAM1-204ENST00000521049 SPRED2Q7Z698 418 aa19.23■□□□□ 0.67
TRAM1-204ENST00000521049 MCF2L2Q86YR7 1114 aa19.23■□□□□ 0.67
TRAM1-204ENST00000521049 SYTL5Q8TDW5 730 aaPredicted RBP19.23■□□□□ 0.67
TRAM1-204ENST00000521049 TBC1D5Q92609 795 aa19.23■□□□□ 0.67
TRAM1-204ENST00000521049 DHX38Q92620 1227 aaKnown RBP19.23■□□□□ 0.67
TRAM1-204ENST00000521049 UBA5Q9GZZ9 404 aa19.23■□□□□ 0.67
TRAM1-204ENST00000521049 GTF2IRD1Q9UHL9 959 aa19.23■□□□□ 0.67
TRAM1-204ENST00000521049 HCN4Q9Y3Q4 1203 aa19.23■□□□□ 0.67
TRAM1-204ENST00000521049 ABCB11O95342 1321 aa19.23■□□□□ 0.67
TRAM1-204ENST00000521049 SCN5AQ14524 2016 aa19.22■□□□□ 0.67
TRAM1-204ENST00000521049 A0A0D9SFI3 127 aa19.22■□□□□ 0.67
TRAM1-204ENST00000521049 NBNO60934 754 aa19.22■□□□□ 0.67
TRAM1-204ENST00000521049 GOLGA8HP0CJ92 632 aa19.22■□□□□ 0.67
TRAM1-204ENST00000521049 PDE1AP54750 535 aa19.22■□□□□ 0.67
TRAM1-204ENST00000521049 HAND2P61296 217 aa19.22■□□□□ 0.67
TRAM1-204ENST00000521049 ERVK-21P61565 698 aa19.22■□□□□ 0.67
TRAM1-204ENST00000521049 DEFB103AP81534 67 aa19.22■□□□□ 0.67
TRAM1-204ENST00000521049 ANKRD45Q5TZF3 282 aa19.22■□□□□ 0.67
TRAM1-204ENST00000521049 C7orf31Q8N865 590 aa19.22■□□□□ 0.67
TRAM1-204ENST00000521049 EMID1Q96A84 441 aaPredicted RBP19.22■□□□□ 0.67
TRAM1-204ENST00000521049 TGS1Q96RS0 853 aaKnown RBP19.22■□□□□ 0.67
TRAM1-204ENST00000521049 RNF41Q9H4P4 317 aaPredicted RBP19.22■□□□□ 0.67
TRAM1-204ENST00000521049 SUGCTQ9HAC7 445 aa19.22■□□□□ 0.67
TRAM1-204ENST00000521049 DDX41Q9UJV9 622 aaKnown RBP19.22■□□□□ 0.67
TRAM1-204ENST00000521049 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.21■□□□□ 0.67
TRAM1-204ENST00000521049 EIF3JO75822 258 aaKnown RBP19.21■□□□□ 0.67
TRAM1-204ENST00000521049 PTK7Q13308 1070 aa19.21■□□□□ 0.67
TRAM1-204ENST00000521049 LAMC2Q13753 1193 aa19.21■□□□□ 0.67
TRAM1-204ENST00000521049 IKBKEQ14164 716 aa19.21■□□□□ 0.67
TRAM1-204ENST00000521049 CCDC178Q5BJE1 867 aa19.21■□□□□ 0.67
TRAM1-204ENST00000521049 CHST3Q7LGC8 479 aa19.21■□□□□ 0.67
TRAM1-204ENST00000521049 TMCO2Q7Z6W1 182 aaPredicted RBP19.21■□□□□ 0.67
TRAM1-204ENST00000521049 ESR2Q92731 530 aa19.21■□□□□ 0.67
TRAM1-204ENST00000521049 RMDN3Q96TC7 470 aa19.21■□□□□ 0.67
TRAM1-204ENST00000521049 KATNAL1Q9BW62 490 aa19.21■□□□□ 0.67
TRAM1-204ENST00000521049 HDAC6Q9UBN7 1215 aa19.21■□□□□ 0.67
TRAM1-204ENST00000521049 PI4K2BG5E9Z4 385 aa19.2■□□□□ 0.66
TRAM1-204ENST00000521049 PSEN2P49810 448 aa19.2■□□□□ 0.66
TRAM1-204ENST00000521049 CDC37Q16543 378 aaPredicted RBP19.2■□□□□ 0.66
TRAM1-204ENST00000521049 ZNF589Q86UQ0 364 aaPredicted RBP19.2■□□□□ 0.66
TRAM1-204ENST00000521049 GDPD5Q8WTR4 605 aa19.2■□□□□ 0.66
TRAM1-204ENST00000521049 ANKS1AQ92625 1134 aa19.2■□□□□ 0.66
TRAM1-204ENST00000521049 CPVLQ9H3G5 476 aa19.2■□□□□ 0.66
TRAM1-204ENST00000521049 COL20A1Q9P218 1284 aa19.2■□□□□ 0.66
TRAM1-204ENST00000521049 MRPL11Q9Y3B7 192 aaKnown RBP19.2■□□□□ 0.66
TRAM1-204ENST00000521049 LINC01553A4QN01 128 aa19.19■□□□□ 0.66
TRAM1-204ENST00000521049 HAS3O00219 553 aa19.19■□□□□ 0.66
TRAM1-204ENST00000521049 NMIQ13287 307 aaPredicted RBP19.19■□□□□ 0.66
TRAM1-204ENST00000521049 TCTN1Q2MV58 587 aa19.19■□□□□ 0.66
TRAM1-204ENST00000521049 TBC1D10CQ8IV04 446 aa19.19■□□□□ 0.66
TRAM1-204ENST00000521049 ADGRF4Q8IZF3 695 aa19.19■□□□□ 0.66
TRAM1-204ENST00000521049 KHSRPQ92945 711 aaKnown RBP eCLIP19.19■□□□□ 0.664e-7■■■□□ 15.2
TRAM1-204ENST00000521049 PPFIA4O75335 1185 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 F2P00734 622 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 MFSD10Q14728 455 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 TRIM71Q2Q1W2 868 aaKnown RBP19.18■□□□□ 0.66
TRAM1-204ENST00000521049 ARHGEF16Q5VV41 709 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 TRAF7Q6Q0C0 670 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 PNMA1Q8ND90 353 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 PPTC7Q8NI37 304 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 ZKSCAN3Q9BRR0 538 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 ALG1Q9BT22 464 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 UBE2ZQ9H832 354 aaPredicted RBP19.18■□□□□ 0.66
TRAM1-204ENST00000521049 CD320Q9NPF0 282 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 C11orf16Q9NQ32 467 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 INSL6Q9Y581 213 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 CCDC171Q6TFL3 1326 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 TET1Q8NFU7 2136 aa19.18■□□□□ 0.66
TRAM1-204ENST00000521049 ZNF213O14771 459 aa19.17■□□□□ 0.66
TRAM1-204ENST00000521049 NR3C2P08235 984 aa19.17■□□□□ 0.66
TRAM1-204ENST00000521049 MFAP1P55081 439 aaKnown RBP19.17■□□□□ 0.66
TRAM1-204ENST00000521049 KIAA0753Q2KHM9 967 aa19.17■□□□□ 0.66
TRAM1-204ENST00000521049 QRICH1Q2TAL8 776 aa19.17■□□□□ 0.66
TRAM1-204ENST00000521049 LEXMQ3ZCV2 418 aa19.17■□□□□ 0.66
TRAM1-204ENST00000521049 ASPRV1Q53RT3 343 aa19.17■□□□□ 0.66
TRAM1-204ENST00000521049 ZNF618Q5T7W0 954 aa19.17■□□□□ 0.66
TRAM1-204ENST00000521049 IQCA1Q86XH1 822 aa19.17■□□□□ 0.66
TRAM1-204ENST00000521049 FBXO11Q86XK2 927 aa19.17■□□□□ 0.66
TRAM1-204ENST00000521049 DHX37Q8IY37 1157 aaKnown RBP19.17■□□□□ 0.66
TRAM1-204ENST00000521049 MTUS1Q9ULD2 1270 aa19.17■□□□□ 0.66
TRAM1-204ENST00000521049 MRVI1Q9Y6F6 885 aa19.17■□□□□ 0.66
TRAM1-204ENST00000521049 LGR5O75473 907 aa19.16■□□□□ 0.66
TRAM1-204ENST00000521049 HOXD8P13378 290 aaPredicted RBP19.16■□□□□ 0.66
TRAM1-204ENST00000521049 KCNV1Q6PIU1 500 aa19.16■□□□□ 0.66
TRAM1-204ENST00000521049 CRBNQ96SW2 442 aa19.16■□□□□ 0.66
TRAM1-204ENST00000521049 KAT14Q9H8E8 782 aa19.16■□□□□ 0.66
TRAM1-204ENST00000521049 PXMP2Q9NR77 195 aa19.16■□□□□ 0.66
TRAM1-204ENST00000521049 EIF2AK2P19525 551 aaKnown RBP19.15■□□□□ 0.66
TRAM1-204ENST00000521049 MBTPS1Q14703 1052 aa19.15■□□□□ 0.66
TRAM1-204ENST00000521049 MYSM1Q5VVJ2 828 aa19.15■□□□□ 0.66
TRAM1-204ENST00000521049 FAM178BQ8IXR5 827 aa19.15■□□□□ 0.66
TRAM1-204ENST00000521049 GJD3Q8N144 294 aa19.15■□□□□ 0.66
TRAM1-204ENST00000521049 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.15■□□□□ 0.66
TRAM1-204ENST00000521049 JMJD4Q9H9V9 463 aa19.15■□□□□ 0.66
TRAM1-204ENST00000521049 MAP3K20Q9NYL2 800 aaKnown RBP19.15■□□□□ 0.66
TRAM1-204ENST00000521049 CTNNA3Q9UI47 895 aa19.15■□□□□ 0.66
TRAM1-204ENST00000521049 NEDD4P46934 1319 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms