RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-205ENST00000519535 PPP1R12CQ9BZL4 782 aa15.68■□□□□ 0.1
SCUBE2-205ENST00000519535 PPP4R2Q9NY27 417 aa15.68■□□□□ 0.1
SCUBE2-205ENST00000519535 FRMPD4Q14CM0 1322 aa15.68■□□□□ 0.1
SCUBE2-205ENST00000519535 CHD9Q3L8U1 2897 aa15.67■□□□□ 0.1
SCUBE2-205ENST00000519535 EIF3JO75822 258 aaKnown RBP15.67■□□□□ 0.1
SCUBE2-205ENST00000519535 APOBRQ0VD83 1088 aa15.67■□□□□ 0.1
SCUBE2-205ENST00000519535 STXBP2Q15833 593 aa15.67■□□□□ 0.1
SCUBE2-205ENST00000519535 UBE2SQ16763 222 aa15.67■□□□□ 0.1
SCUBE2-205ENST00000519535 LRIT3Q3SXY7 679 aa15.67■□□□□ 0.1
SCUBE2-205ENST00000519535 WNT8AQ9H1J5 351 aa15.67■□□□□ 0.1
SCUBE2-205ENST00000519535 KLF18A0A0U1RQI7 1052 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 DCDC2CA8MYV0 355 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 PPFIA3O75145 1194 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 TIMP1P01033 207 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 NEFLP07196 543 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 MMP3P08254 477 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 CYP2C9P11712 490 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 SMARCA1P28370 1054 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 KIF5BP33176 963 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 HIC1Q14526 733 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 TTLL4Q14679 1199 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 NBPF20Q3BBV1 942 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 RNF20Q5VTR2 975 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 WWC2Q6AWC2 1192 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 FAM109BQ6ICB4 259 aaPredicted RBP15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 Q6ZUG5 572 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 TMTC2Q8N394 836 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 RRP36Q96EU6 259 aaKnown RBP15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 MAF1Q9H063 256 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 ALDH8A1Q9H2A2 487 aaPredicted RBP15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 PRKAG2Q9UGJ0 569 aa15.66■□□□□ 0.1
SCUBE2-205ENST00000519535 ACRP10323 421 aa15.65■□□□□ 0.1
SCUBE2-205ENST00000519535 RAG1P15918 1043 aa15.65■□□□□ 0.1
SCUBE2-205ENST00000519535 UBA1P22314 1058 aaKnown RBP15.65■□□□□ 0.1
SCUBE2-205ENST00000519535 ADD1P35611 737 aaKnown RBP15.65■□□□□ 0.1
SCUBE2-205ENST00000519535 LZTS2Q9BRK4 669 aa15.65■□□□□ 0.1
SCUBE2-205ENST00000519535 LARP6Q9BRS8 491 aaKnown RBP15.65■□□□□ 0.1
SCUBE2-205ENST00000519535 MTG1Q9BT17 334 aaPredicted RBP15.65■□□□□ 0.1
SCUBE2-205ENST00000519535 NOC4LQ9BVI4 516 aaKnown RBP15.65■□□□□ 0.1
SCUBE2-205ENST00000519535 USP26Q9BXU7 913 aa15.65■□□□□ 0.1
SCUBE2-205ENST00000519535 RTEL1Q9NZ71 1219 aa15.65■□□□□ 0.1
SCUBE2-205ENST00000519535 A0A0C4DFX4 3053 aa15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 NKRFO15226 690 aaKnown RBP eCLIP15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 ZBTB43O43298 467 aa15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 DTNBO60941 627 aa15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 CABYRO75952 493 aa15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 GH1P01241 217 aa15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 CSF2RAP15509 400 aa15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 RPS6KB1P23443 525 aa15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 CPT1AP50416 773 aa15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 RTN1Q16799 776 aa15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 BRF1Q92994 677 aa15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 MRVI1Q9Y6F6 885 aa15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 V9GY48 417 aaPredicted RBP15.64■□□□□ 0.09
SCUBE2-205ENST00000519535 GOLGA8AA7E2F4 631 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 GOLGA8BA8MQT2 603 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 PIK3CDO00329 1044 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 ZEB2O60315 1214 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 ZNF286BP0CG31 522 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 GNAQP50148 359 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 CCL23P55773 120 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 HSDL1Q3SXM5 330 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 MYSM1Q5VVJ2 828 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 MFSD5Q6N075 450 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 HEATR3Q7Z4Q2 680 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 WNT8BQ93098 351 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 EMID1Q96A84 441 aaPredicted RBP15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 PGBD1Q96JS3 809 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 AGXT2Q9BYV1 514 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 POLR3EQ9NVU0 708 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 MAP3K20Q9NYL2 800 aaKnown RBP15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 SPTBN5Q9NRC6 3674 aaKnown RBP15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 CHD7Q9P2D1 2997 aa15.63■□□□□ 0.09
SCUBE2-205ENST00000519535 STXBP3O00186 592 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 GGPS1O95749 300 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 CALM1P0DP23 149 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 CALM2P0DP24 149 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 CALM3P0DP25 149 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 HOXD8P13378 290 aaPredicted RBP15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 CCND2P30279 289 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 CHMP4BP1P59074 171 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 FPGSQ05932 587 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 TOB2Q14106 344 aaPredicted RBP15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 KRT32Q14532 448 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 TMEM240Q5SV17 173 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 CELF3Q5SZQ8 465 aaKnown RBP15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 GDF6Q6KF10 455 aaPredicted RBP15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 DHX38Q92620 1227 aaKnown RBP15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 SCLYQ96I15 445 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 INPP4AQ96PE3 977 aaPredicted RBP15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 NCOA5Q9HCD5 579 aaKnown RBP15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 TMEM260Q9NX78 707 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 SCN10AQ9Y5Y9 1956 aa15.62■□□□□ 0.09
SCUBE2-205ENST00000519535 PRUNE2Q8WUY3 3088 aa15.61■□□□□ 0.09
SCUBE2-205ENST00000519535 GRXCR1A8MXD5 290 aa15.61■□□□□ 0.09
SCUBE2-205ENST00000519535 SPATA31C2B4DYI2 1134 aa15.61■□□□□ 0.09
SCUBE2-205ENST00000519535 ATP9AO75110 1047 aa15.61■□□□□ 0.09
SCUBE2-205ENST00000519535 ITGB5P18084 799 aa15.61■□□□□ 0.09
SCUBE2-205ENST00000519535 CASTP20810 708 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms