RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 ERMNQ8TAM6 284 aa16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 ETNPPLQ8TBG4 499 aa16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 GSDMAQ96QA5 445 aa16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 ACAD9Q9H845 621 aa16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 STK17AQ9UEE5 414 aa16.96■□□□□ 0.31
TRAPPC9-205ENST00000518839 PP2D1A8MPX8 630 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 FAM86B1E9PN63 330 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 FAM86B2P0C5J1 330 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 POTEIP0CG38 1075 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 POTEJP0CG39 1038 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 OSBPP22059 807 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 COPB2P35606 906 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 STAT3P40763 770 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 AMPD3Q01432 767 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 CEP55Q53EZ4 464 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 CT47A1Q5JQC4 288 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 TREML2Q5T2D2 321 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 XRRA1Q6P2D8 792 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 C2orf69Q8N8R5 385 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 SPATA20Q8TB22 786 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 SYTL5Q8TDW5 730 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 GTF3C2Q8WUA4 911 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 ERCC4Q92889 916 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 LENG9Q96B70 501 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 NT5C3AQ9H0P0 336 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 CBX8Q9HC52 389 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 GBA2Q9HCG7 927 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 HOMER2Q9NSB8 354 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 RMND1Q9NWS8 449 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 FBXO40Q9UH90 709 aa16.95■□□□□ 0.3
TRAPPC9-205ENST00000518839 IGLV3-22A0A075B6J6 115 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 GOLGA6L19H0YKK7 550 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 BCRP11274 1271 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 CDC25AP30304 524 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 AFMP43652 599 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 RPS6P62753 249 aaKnown RBP16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 CCDC173Q0VFZ6 552 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 DPYDQ12882 1025 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 PCNX4Q63HM2 1172 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 HAUS3Q68CZ6 603 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 PLA2G4DQ86XP0 818 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 KCTD17Q8N5Z5 321 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 SNX29Q8TEQ0 813 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 WNK4Q96J92 1243 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 MMTAG2Q9BU76 263 aaKnown RBP16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 GTPBP4Q9BZE4 634 aaKnown RBP16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 LRRC27Q9C0I9 530 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 ZNF408Q9H9D4 720 aa16.94■□□□□ 0.3
TRAPPC9-205ENST00000518839 POTEMA6NI47 508 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 SMTNL1A8MU46 457 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 BECN2A8MW95 431 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 TRAF5O00463 557 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 BIN1O00499 593 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 FOXN1O15353 648 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 MSH4O15457 936 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 PRR29P0C7W0 189 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 PLCG1P19174 1290 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 HYIQ5T013 277 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 NSMFQ6X4W1 530 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 C11orf57Q6ZUT1 292 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 RIOX2Q8IUF8 465 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 MLKLQ8NB16 471 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 CCDC47Q96A33 483 aaKnown RBP16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 MXRA8Q9BRK3 442 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 KBTBD4Q9NVX7 518 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 MAN1B1Q9UKM7 699 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 PNMA3Q9UL41 463 aa16.93■□□□□ 0.3
TRAPPC9-205ENST00000518839 MEIS1O00470 390 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 TPM4P67936 248 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 MORC3Q14149 939 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 PLS1Q14651 629 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 DPCR1Q3MIW9 517 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 TMEM119Q4V9L6 283 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 NAALADL2Q58DX5 795 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 GRAMD1CQ8IYS0 662 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 WDR11Q9BZH6 1224 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 ASCC2Q9H1I8 757 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 COL20A1Q9P218 1284 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 SLC45A1Q9Y2W3 748 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 RIPK3Q9Y572 518 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 LOXHD1Q8IVV2 1947 aa16.92■□□□□ 0.3
TRAPPC9-205ENST00000518839 SLC25A27O95847 323 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 CETPP11597 493 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 CCT6AP40227 531 aaKnown RBP16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 GTF2A2P52657 109 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 HERVK_113P62684 666 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 GRB10Q13322 594 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 BAATQ14032 418 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 IQCB1Q15051 598 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 ARHGEF16Q5VV41 709 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 SLC30A10Q6XR72 485 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 SV2BQ7L1I2 683 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 SLC5A5Q92911 643 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 RMDN3Q96TC7 470 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 PXMP2Q9NR77 195 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 UBIAD1Q9Y5Z9 338 aa16.91■□□□□ 0.3
TRAPPC9-205ENST00000518839 PFASO15067 1338 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms