RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 CTDSPL2Q05D32 466 aa13.76□□□□□ -0.21
TMEM55A-202ENST00000518359 NEK9Q8TD19 979 aa13.76□□□□□ -0.21
TMEM55A-202ENST00000518359 AFG1LQ8WV93 481 aa13.76□□□□□ -0.21
TMEM55A-202ENST00000518359 DHX38Q92620 1227 aaKnown RBP13.76□□□□□ -0.21
TMEM55A-202ENST00000518359 SAMD11Q96NU1 681 aa13.76□□□□□ -0.21
TMEM55A-202ENST00000518359 CTAGE1Q96RT6 745 aa13.76□□□□□ -0.21
TMEM55A-202ENST00000518359 SEC62Q99442 399 aaKnown RBP13.76□□□□□ -0.21
TMEM55A-202ENST00000518359 FSD1Q9BTV5 496 aa13.76□□□□□ -0.21
TMEM55A-202ENST00000518359 GPCPD1Q9NPB8 672 aa13.76□□□□□ -0.21
TMEM55A-202ENST00000518359 PRKAG3Q9UGI9 489 aa13.76□□□□□ -0.21
TMEM55A-202ENST00000518359 GTF2IRD1Q9UHL9 959 aa13.76□□□□□ -0.21
TMEM55A-202ENST00000518359 FRMPD2Q68DX3 1309 aaPredicted RBP13.75□□□□□ -0.21
TMEM55A-202ENST00000518359 EMSYQ7Z589 1322 aa13.75□□□□□ -0.21
TMEM55A-202ENST00000518359 ARIH2O95376 493 aa13.75□□□□□ -0.21
TMEM55A-202ENST00000518359 TOP1P11387 765 aaKnown RBP13.75□□□□□ -0.21
TMEM55A-202ENST00000518359 PTK7Q13308 1070 aa13.75□□□□□ -0.21
TMEM55A-202ENST00000518359 DGKDQ16760 1214 aa13.75□□□□□ -0.21
TMEM55A-202ENST00000518359 TSHZ3Q63HK5 1081 aa13.75□□□□□ -0.21
TMEM55A-202ENST00000518359 CCDC62Q6P9F0 684 aa13.75□□□□□ -0.21
TMEM55A-202ENST00000518359 FBXL18Q96ME1 805 aa13.75□□□□□ -0.21
TMEM55A-202ENST00000518359 C17orf80Q9BSJ5 609 aa13.75□□□□□ -0.21
TMEM55A-202ENST00000518359 UPF3BQ9BZI7 483 aaKnown RBP13.75□□□□□ -0.21
TMEM55A-202ENST00000518359 TOMM22Q9NS69 142 aa13.75□□□□□ -0.21
TMEM55A-202ENST00000518359 ZNF318Q5VUA4 2279 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 TTC41PQ6P2S7 1318 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 H3BQ06 376 aaPredicted RBP13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 ORC4O43929 436 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 LGR5O75473 907 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 ARHGAP1Q07960 439 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 ZMYM1Q5SVZ6 1142 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 EP400NLQ6ZTU2 488 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 CHST3Q7LGC8 479 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 BANK1Q8NDB2 785 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 RGS22Q8NE09 1264 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 KAT2BQ92831 832 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 PABPC5Q96DU9 382 aaKnown RBP13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 MAF1Q9H063 256 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 HDAC6Q9UBN7 1215 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 ANAPC4Q9UJX5 808 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 TRIOO75962 3097 aa13.74□□□□□ -0.21
TMEM55A-202ENST00000518359 COL4A6Q14031 1691 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 POTEB3A0JP26 581 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 PDHBP11177 359 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 PSEN2P49810 448 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 HTRA4P83105 476 aaPredicted RBP13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 ZP2Q05996 745 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 STXBP2Q15833 593 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 LY6KQ17RY6 165 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 POTEBQ6S5H4 581 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 SEPT14Q6ZU15 432 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 MYOCDQ8IZQ8 938 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 NSUN6Q8TEA1 469 aaKnown RBP13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 SNX27Q96L92 541 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 MFSD14AQ96MC6 490 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 TMEM47Q9BQJ4 181 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 ALG1Q9BT22 464 aa13.73□□□□□ -0.21
TMEM55A-202ENST00000518359 NCK2O43639 380 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 F2P00734 622 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 MFSD10Q14728 455 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 KIAA0753Q2KHM9 967 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 TCTN1Q2MV58 587 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 USH1GQ495M9 461 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 EPC2Q52LR7 807 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 RRP12Q5JTH9 1297 aaKnown RBP13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 ZNF618Q5T7W0 954 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 ADHFE1Q8IWW8 467 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 DHX37Q8IY37 1157 aaKnown RBP13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 IWS1Q96ST2 819 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 YME1L1Q96TA2 773 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 POP1Q99575 1024 aaKnown RBP13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 NSUN3Q9H649 340 aaKnown RBP13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 INCENPQ9NQS7 918 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 C5orf42Q9H799 3197 aa13.72□□□□□ -0.21
TMEM55A-202ENST00000518359 ATG2AQ2TAZ0 1938 aa13.71□□□□□ -0.21
TMEM55A-202ENST00000518359 H3BNC9 293 aa13.71□□□□□ -0.21
TMEM55A-202ENST00000518359 ZNF543Q08ER8 600 aa13.71□□□□□ -0.21
TMEM55A-202ENST00000518359 GPM6BQ13491 265 aa13.71□□□□□ -0.21
TMEM55A-202ENST00000518359 LAMC2Q13753 1193 aa13.71□□□□□ -0.21
TMEM55A-202ENST00000518359 TRIM71Q2Q1W2 868 aaKnown RBP13.71□□□□□ -0.21
TMEM55A-202ENST00000518359 TCEAL5Q5H9L2 206 aa13.71□□□□□ -0.21
TMEM55A-202ENST00000518359 GPATCH4Q5T3I0 446 aaKnown RBP13.71□□□□□ -0.21
TMEM55A-202ENST00000518359 EMID1Q96A84 441 aaPredicted RBP13.71□□□□□ -0.21
TMEM55A-202ENST00000518359 TCP11L1Q9NUJ3 509 aa13.71□□□□□ -0.21
TMEM55A-202ENST00000518359 CLDND1Q9NY35 253 aa13.71□□□□□ -0.21
TMEM55A-202ENST00000518359 ABCB11O95342 1321 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 C19orf67A6NJJ6 358 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 RSPH10B2B2RC85 870 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 FGRP09769 529 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 RSPH10BP0C881 870 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 MBTPS1Q14703 1052 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 COL19A1Q14993 1142 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 TRAF7Q6Q0C0 670 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 FBXO11Q86XK2 927 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 MCF2L2Q86YR7 1114 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 DBF4BQ8NFT6 615 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 PPTC7Q8NI37 304 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 TTC14Q96N46 770 aa13.7□□□□□ -0.22
TMEM55A-202ENST00000518359 DCTPP1Q9H773 170 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms