RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 NHLH1Q02575 133 aa11.99□□□□□ -0.49
DDR1-276ENST00000514534 GPNMBQ14956 572 aa11.99□□□□□ -0.49
DDR1-276ENST00000514534 NEK9Q8TD19 979 aa11.99□□□□□ -0.49
DDR1-276ENST00000514534 AFG1LQ8WV93 481 aa11.99□□□□□ -0.49
DDR1-276ENST00000514534 CLEC4DQ8WXI8 215 aa11.99□□□□□ -0.49
DDR1-276ENST00000514534 MRPL38Q96DV4 380 aaKnown RBP11.99□□□□□ -0.49
DDR1-276ENST00000514534 SEC62Q99442 399 aaKnown RBP11.99□□□□□ -0.49
DDR1-276ENST00000514534 MAF1Q9H063 256 aa11.99□□□□□ -0.49
DDR1-276ENST00000514534 PRKAG3Q9UGI9 489 aa11.99□□□□□ -0.49
DDR1-276ENST00000514534 GTF2IRD1Q9UHL9 959 aa11.99□□□□□ -0.49
DDR1-276ENST00000514534 WDR19Q8NEZ3 1342 aa11.99□□□□□ -0.49
DDR1-276ENST00000514534 MYH7BA7E2Y1 1941 aa11.98□□□□□ -0.49
DDR1-276ENST00000514534 NLRC5Q86WI3 1866 aa11.98□□□□□ -0.49
DDR1-276ENST00000514534 ARIH2O95376 493 aa11.98□□□□□ -0.49
DDR1-276ENST00000514534 TOP1P11387 765 aaKnown RBP11.98□□□□□ -0.49
DDR1-276ENST00000514534 PTK7Q13308 1070 aa11.98□□□□□ -0.49
DDR1-276ENST00000514534 DGKDQ16760 1214 aa11.98□□□□□ -0.49
DDR1-276ENST00000514534 C7orf31Q8N865 590 aa11.98□□□□□ -0.49
DDR1-276ENST00000514534 DHX38Q92620 1227 aaKnown RBP11.98□□□□□ -0.49
DDR1-276ENST00000514534 FBXL18Q96ME1 805 aa11.98□□□□□ -0.49
DDR1-276ENST00000514534 CTAGE1Q96RT6 745 aa11.98□□□□□ -0.49
DDR1-276ENST00000514534 FSD1Q9BTV5 496 aa11.98□□□□□ -0.49
DDR1-276ENST00000514534 FRMPD2Q68DX3 1309 aaPredicted RBP11.97□□□□□ -0.49
DDR1-276ENST00000514534 TTC41PQ6P2S7 1318 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 EMSYQ7Z589 1322 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 POTEB3A0JP26 581 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 ORC4O43929 436 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 LGR5O75473 907 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 AMHP03971 560 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 CTDSPL2Q05D32 466 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 ZMYM1Q5SVZ6 1142 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 TSHZ3Q63HK5 1081 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 FAM117BQ6P1L5 589 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 CCDC62Q6P9F0 684 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 POTEBQ6S5H4 581 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 SEPT14Q6ZU15 432 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 RGS22Q8NE09 1264 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 KAT2BQ92831 832 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 PABPC5Q96DU9 382 aaKnown RBP11.97□□□□□ -0.49
DDR1-276ENST00000514534 C17orf80Q9BSJ5 609 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 UPF3BQ9BZI7 483 aaKnown RBP11.97□□□□□ -0.49
DDR1-276ENST00000514534 GPCPD1Q9NPB8 672 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 TOMM22Q9NS69 142 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 HDAC6Q9UBN7 1215 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 ANAPC4Q9UJX5 808 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 RALGAPA2Q2PPJ7 1873 aa11.97□□□□□ -0.49
DDR1-276ENST00000514534 MYH6P13533 1939 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 PDHBP11177 359 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 PSEN2P49810 448 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 HTRA4P83105 476 aaPredicted RBP11.96□□□□□ -0.49
DDR1-276ENST00000514534 ARHGAP1Q07960 439 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 STXBP2Q15833 593 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 LY6KQ17RY6 165 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 CHST3Q7LGC8 479 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 MYOCDQ8IZQ8 938 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 BANK1Q8NDB2 785 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
DDR1-276ENST00000514534 MFSD14AQ96MC6 490 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 TMEM47Q9BQJ4 181 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 ALG1Q9BT22 464 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 NSUN3Q9H649 340 aaKnown RBP11.96□□□□□ -0.49
DDR1-276ENST00000514534 INCENPQ9NQS7 918 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 TCP11L1Q9NUJ3 509 aa11.96□□□□□ -0.49
DDR1-276ENST00000514534 H3BNC9 293 aa11.95□□□□□ -0.5
DDR1-276ENST00000514534 H3BQ06 376 aaPredicted RBP11.95□□□□□ -0.5
DDR1-276ENST00000514534 NCK2O43639 380 aa11.95□□□□□ -0.5
DDR1-276ENST00000514534 FGRP09769 529 aa11.95□□□□□ -0.5
DDR1-276ENST00000514534 ZP2Q05996 745 aa11.95□□□□□ -0.5
DDR1-276ENST00000514534 ZNF543Q08ER8 600 aa11.95□□□□□ -0.5
DDR1-276ENST00000514534 MFSD10Q14728 455 aa11.95□□□□□ -0.5
DDR1-276ENST00000514534 EPC2Q52LR7 807 aa11.95□□□□□ -0.5
DDR1-276ENST00000514534 ZNF618Q5T7W0 954 aa11.95□□□□□ -0.5
DDR1-276ENST00000514534 EP400NLQ6ZTU2 488 aa11.95□□□□□ -0.5
DDR1-276ENST00000514534 DHX37Q8IY37 1157 aaKnown RBP11.95□□□□□ -0.5
DDR1-276ENST00000514534 NSUN6Q8TEA1 469 aaKnown RBP11.95□□□□□ -0.5
DDR1-276ENST00000514534 EMID1Q96A84 441 aaPredicted RBP11.95□□□□□ -0.5
DDR1-276ENST00000514534 IWS1Q96ST2 819 aa11.95□□□□□ -0.5
DDR1-276ENST00000514534 ZNF318Q5VUA4 2279 aa11.95□□□□□ -0.5
DDR1-276ENST00000514534 ABCB11O95342 1321 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 C19orf67A6NJJ6 358 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 HAS3O00219 553 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 F2P00734 622 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 GPM6BQ13491 265 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 LAMC2Q13753 1193 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 KIAA0753Q2KHM9 967 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 TCTN1Q2MV58 587 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 TRIM71Q2Q1W2 868 aaKnown RBP11.94□□□□□ -0.5
DDR1-276ENST00000514534 USH1GQ495M9 461 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 RRP12Q5JTH9 1297 aaKnown RBP11.94□□□□□ -0.5
DDR1-276ENST00000514534 GPATCH4Q5T3I0 446 aaKnown RBP11.94□□□□□ -0.5
DDR1-276ENST00000514534 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.94□□□□□ -0.5
DDR1-276ENST00000514534 MCF2L2Q86YR7 1114 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 ADHFE1Q8IWW8 467 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 DBF4BQ8NFT6 615 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 SNX27Q96L92 541 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 TTC14Q96N46 770 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 YME1L1Q96TA2 773 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 POP1Q99575 1024 aaKnown RBP11.94□□□□□ -0.5
DDR1-276ENST00000514534 DCTPP1Q9H773 170 aa11.94□□□□□ -0.5
DDR1-276ENST00000514534 DDX41Q9UJV9 622 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms