RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 SMIM22K7EJ46 135 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 GPAA1O43292 621 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 ARHGEF15O94989 841 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 AKR1A1P14550 325 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 ADCYAP1R1P41586 468 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 PDE4BQ07343 736 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 KLRC3Q07444 240 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 LRRC41Q15345 812 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 ZNF792Q3KQV3 632 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 PRAMEF19Q5SWL8 479 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 ANO1Q5XXA6 986 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 SNRNP48Q6IEG0 339 aaKnown RBP8.54□□□□□ -1.04
USP46-208ENST00000512656 SLC39A5Q6ZMH5 540 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 OSBP2Q969R2 916 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 DDX11Q96FC9 970 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 ESYT1Q9BSJ8 1104 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 XPNPEP3Q9NQH7 507 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 CLIP2Q9UDT6 1046 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 FBXO40Q9UH90 709 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 MYH8P13535 1937 aa8.54□□□□□ -1.04
USP46-208ENST00000512656 BAZ2AQ9UIF9 1905 aaKnown RBP8.54□□□□□ -1.04
USP46-208ENST00000512656 RLFQ13129 1914 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 ATP2A1O14983 1001 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 TTLL1O95922 423 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 NDUFB10O96000 172 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 PGK2P07205 417 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 TSPY3P0CV98 308 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 TSPY8P0CW00 308 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 POU4F2Q12837 409 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 GAS6Q14393 721 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 SNX17Q15036 470 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 FAM47AQ5JRC9 791 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 C1orf53Q5VUE5 145 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 FAM109BQ6ICB4 259 aaPredicted RBP8.53□□□□□ -1.04
USP46-208ENST00000512656 TAS1R3Q7RTX0 852 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 STK11IPQ8N1F8 1099 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 PHTF2Q8N3S3 785 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 REPS2Q8NFH8 660 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 MKL1Q969V6 931 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 FERMT2Q96AC1 680 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 NUP88Q99567 741 aaPredicted RBP8.53□□□□□ -1.04
USP46-208ENST00000512656 PRDM5Q9NQX1 630 aaPredicted RBP8.53□□□□□ -1.04
USP46-208ENST00000512656 MTMR4Q9NYA4 1195 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 FEM1BQ9UK73 627 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 PHF24Q9UPV7 400 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 STXBP5LQ9Y2K9 1186 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 SYNGAP1Q96PV0 1343 aa8.53□□□□□ -1.04
USP46-208ENST00000512656 MYH7P12883 1935 aa8.52□□□□□ -1.04
USP46-208ENST00000512656 IGKV6D-41A0A0C4DH26 115 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 M0R2C6 588 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 GSK3AP49840 483 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 OAZ1P54368 228 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 USP4Q13107 963 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 TRIM60Q495X7 471 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 TSHZ3Q63HK5 1081 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 Q7L0L9 218 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 IFNL3Q8IZI9 196 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 CPXCR1Q8N123 301 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 ANKRD35Q8N283 1001 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 GMCL1P1Q8NEA9 526 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 CHST13Q8NET6 341 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 NEDD1Q8NHV4 660 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 CHURC1Q8WUH1 139 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 NUP133Q8WUM0 1156 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 CEP95Q96GE4 821 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 FSD1Q9BTV5 496 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 NAPBQ9H115 298 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 SPC25Q9HBM1 224 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 EPB41L4AQ9HCS5 686 aaPredicted RBP8.52□□□□□ -1.05
USP46-208ENST00000512656 MTMR10Q9NXD2 777 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 FAM184BQ9ULE4 1060 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 ISY1Q9ULR0 285 aaKnown RBP8.52□□□□□ -1.05
USP46-208ENST00000512656 HRH3Q9Y5N1 445 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 TACC3Q9Y6A5 838 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 FRMPD3Q5JV73 1810 aa8.52□□□□□ -1.05
USP46-208ENST00000512656 PRDM1O75626 825 aa8.51□□□□□ -1.05
USP46-208ENST00000512656 PGK1P00558 417 aa8.51□□□□□ -1.05
USP46-208ENST00000512656 ZNF865P0CJ78 1059 aaPredicted RBP8.51□□□□□ -1.05
USP46-208ENST00000512656 BMP3P12645 472 aa8.51□□□□□ -1.05
USP46-208ENST00000512656 TAL1P17542 331 aaPredicted RBP8.51□□□□□ -1.05
USP46-208ENST00000512656 TLE2Q04725 743 aa8.51□□□□□ -1.05
USP46-208ENST00000512656 DBN1Q16643 649 aa8.51□□□□□ -1.05
USP46-208ENST00000512656 ZMYM1Q5SVZ6 1142 aa8.51□□□□□ -1.05
USP46-208ENST00000512656 SLFN13Q68D06 897 aa8.51□□□□□ -1.05
USP46-208ENST00000512656 MAMDC4Q6UXC1 1216 aa8.51□□□□□ -1.05
USP46-208ENST00000512656 FAM160B2Q86V87 743 aa8.51□□□□□ -1.05
USP46-208ENST00000512656 SLC38A10Q9HBR0 1119 aa8.51□□□□□ -1.05
USP46-208ENST00000512656 PDLIM7Q9NR12 457 aa8.51□□□□□ -1.05
USP46-208ENST00000512656 ZHX1Q9UKY1 873 aaPredicted RBP8.51□□□□□ -1.05
USP46-208ENST00000512656 PLIN4Q96Q06 1357 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 DNAJC25-GNG10A0A024R161 153 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 A0A1W2PQ45 241 aaPredicted RBP8.5□□□□□ -1.05
USP46-208ENST00000512656 A0A1W2PQY0 241 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 DCDC2CA8MYV0 355 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 TMEM232C9JQI7 657 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 DLL1O00548 723 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 DUSP11O75319 330 aaKnown RBP8.5□□□□□ -1.05
USP46-208ENST00000512656 IL2RAP01589 272 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 F11P03951 625 aa8.5□□□□□ -1.05
USP46-208ENST00000512656 CLTBP09497 229 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms