RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 MTMR8Q96EF0 704 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 SDF4Q9BRK5 362 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 PYM1Q9BRP8 204 aaKnown RBP9.18□□□□□ -0.94
HTT-209ENST00000512068 KIAA1683Q9H0B3 1180 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 CLSTN2Q9H4D0 955 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 RIC8AQ9NPQ8 531 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.18□□□□□ -0.94
HTT-209ENST00000512068 BIN2Q9UBW5 565 aaPredicted RBP9.18□□□□□ -0.94
HTT-209ENST00000512068 PRR12Q9ULL5 1215 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 A0A1B0GVL5 298 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 SPDYE3A6NKU9 549 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 C19orf81C9J6K1 198 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 LAD1O00515 517 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 CCNT1O60563 726 aaKnown RBP9.17□□□□□ -0.94
HTT-209ENST00000512068 PLA2G6O60733 806 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 VEGFAP15692 232 aaPredicted RBP9.17□□□□□ -0.94
HTT-209ENST00000512068 PFKFB1P16118 471 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 TOB1P50616 345 aaPredicted RBP9.17□□□□□ -0.94
HTT-209ENST00000512068 KCNH2Q12809 1159 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 AP3B2Q13367 1082 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 NPY5RQ15761 445 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 CAMK4Q16566 473 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 LETM2Q2VYF4 491 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 NOL9Q5SY16 702 aaKnown RBP9.17□□□□□ -0.94
HTT-209ENST00000512068 CCDC174Q6PII3 467 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 CCDC84Q86UT8 332 aaPredicted RBP9.17□□□□□ -0.94
HTT-209ENST00000512068 ZNF280CQ8ND82 737 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 RASSF8Q8NHQ8 419 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 SHISA4Q96DD7 197 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 SLF1Q9BQI6 1058 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.17□□□□□ -0.94
HTT-209ENST00000512068 ZNF112Q9UJU3 913 aa9.17□□□□□ -0.94
HTT-209ENST00000512068 MRPL11Q9Y3B7 192 aaKnown RBP9.17□□□□□ -0.94
HTT-209ENST00000512068 SRPRBQ9Y5M8 271 aaKnown RBP9.17□□□□□ -0.94
HTT-209ENST00000512068 MORC2Q9Y6X9 1032 aaPredicted RBP9.17□□□□□ -0.94
HTT-209ENST00000512068 ABCB11O95342 1321 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 VWA3AA6NCI4 1184 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 ADM5C9JUS6 153 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 NEMFO60524 1076 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 ZBED4O75132 1171 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 FLOT1O75955 427 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 FOSP01100 380 aaPredicted RBP9.16□□□□□ -0.94
HTT-209ENST00000512068 PTPRAP18433 802 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 ATP2C1P98194 919 aaPredicted RBP9.16□□□□□ -0.94
HTT-209ENST00000512068 SPP2Q13103 211 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 TMEM266Q2M3C6 531 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 EARS2Q5JPH6 523 aaKnown RBP9.16□□□□□ -0.94
HTT-209ENST00000512068 RESP18Q5W5W9 173 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 ARL6IP4Q66PJ3 421 aaKnown RBP9.16□□□□□ -0.94
HTT-209ENST00000512068 DTHD1Q6ZMT9 781 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 ARMC9Q7Z3E5 817 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 TEX2Q8IWB9 1127 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 PRPF38AQ8NAV1 312 aaKnown RBP9.16□□□□□ -0.94
HTT-209ENST00000512068 TBCKQ8TEA7 893 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 ZKSCAN4Q969J2 545 aaPredicted RBP9.16□□□□□ -0.94
HTT-209ENST00000512068 KLRG1Q96E93 195 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 WDR18Q9BV38 432 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 RAB34Q9BZG1 259 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 GOLPH3LQ9H4A5 285 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 GRPEL1Q9HAV7 217 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 MAP10Q9P2G4 905 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 FBXO2Q9UK22 296 aaPredicted RBP9.16□□□□□ -0.94
HTT-209ENST00000512068 ZHX2Q9Y6X8 837 aa9.16□□□□□ -0.94
HTT-209ENST00000512068 WDR90Q96KV7 1748 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 M0R2N6 131 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 GPR37L1O60883 481 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 ZNF202O95125 648 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 OR52Z1P0C646 297 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 GCFC2P16383 781 aaKnown RBP9.15□□□□□ -0.94
HTT-209ENST00000512068 VCAM1P19320 739 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 GGCXP38435 758 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 NDUFA8P51970 172 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 BACE1P56817 501 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 SNAP25P60880 206 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 UBE2SQ16763 222 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 AXDND1Q5T1B0 1012 aaPredicted RBP9.15□□□□□ -0.94
HTT-209ENST00000512068 KANK3Q6NY19 840 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 CKAP2LQ8IYA6 745 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 CEP57L1Q8IYX8 460 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 CNNM3Q8NE01 707 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 CDCA5Q96FF9 252 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 TIGD1Q96MW7 591 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 CLIC6Q96NY7 704 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 ANO3Q9BYT9 981 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 GLIS2Q9BZE0 524 aaPredicted RBP9.15□□□□□ -0.94
HTT-209ENST00000512068 CSRNP2Q9H175 543 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 RANBP17Q9H2T7 1088 aaKnown RBP9.15□□□□□ -0.94
HTT-209ENST00000512068 TAF1DQ9H5J8 278 aaPredicted RBP9.15□□□□□ -0.94
HTT-209ENST00000512068 RPAP3Q9H6T3 665 aaPredicted RBP9.15□□□□□ -0.94
HTT-209ENST00000512068 TMEM260Q9NX78 707 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 CCDC39Q9UFE4 941 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 KCNH3Q9ULD8 1083 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 CCPG1Q9ULG6 757 aa9.15□□□□□ -0.94
HTT-209ENST00000512068 MYH7BA7E2Y1 1941 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 RNF223E7ERA6 249 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 GCOM1H8Y6P7 765 aaPredicted RBP9.14□□□□□ -0.95
HTT-209ENST00000512068 PPP1R11O60927 126 aaPredicted RBP9.14□□□□□ -0.95
HTT-209ENST00000512068 USP2O75604 605 aaPredicted RBP9.14□□□□□ -0.95
HTT-209ENST00000512068 POLR2MP0CAP2 368 aa9.14□□□□□ -0.95
HTT-209ENST00000512068 CTHP32929 405 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms