RNA–Protein interactions for RNA: ENST00000511238.5

TBC1D1-217, Transcript of TBC1 domain family member 1, humanhuman

TSL 3

Gene TBC1D1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-217ENST00000511238 ATL2Q8NHH9 583 aa6.4□□□□□ -1.38
TBC1D1-217ENST00000511238 FBLIM1Q8WUP2 373 aa6.4□□□□□ -1.38
TBC1D1-217ENST00000511238 EZH1Q92800 747 aaPredicted RBP6.4□□□□□ -1.38
TBC1D1-217ENST00000511238 UTP4Q969X6 686 aaKnown RBP6.4□□□□□ -1.38
TBC1D1-217ENST00000511238 ATG4CQ96DT6 458 aa6.4□□□□□ -1.38
TBC1D1-217ENST00000511238 SEMA6CQ9H3T2 930 aa6.4□□□□□ -1.38
TBC1D1-217ENST00000511238 SMC4Q9NTJ3 1288 aa6.4□□□□□ -1.38
TBC1D1-217ENST00000511238 PCOLCE2Q9UKZ9 415 aa6.4□□□□□ -1.38
TBC1D1-217ENST00000511238 KIF16BQ96L93 1317 aa6.4□□□□□ -1.39
TBC1D1-217ENST00000511238 RGPD3A6NKT7 1758 aaPredicted RBP6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 RGPD4Q7Z3J3 1758 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 ERVV-2B6SEH9 535 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 SMAD7O15105 426 aaKnown RBP6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 NFICP08651 508 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 U2AF1L5P0DN76 240 aaPredicted RBP6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 BMP3P12645 472 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 NME1P15531 152 aaKnown RBP6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 ZSCAN20P17040 1043 aaPredicted RBP6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 CAP2P40123 477 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 U2AF1Q01081 240 aaKnown RBP eCLIP6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 RASSF7Q02833 373 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 KIAA2012Q0VF49 1180 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 NEXNQ0ZGT2 675 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 CDCP2Q5VXM1 449 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 ANKS3Q6ZW76 656 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 NLRC3Q7RTR2 1065 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 FAM20CQ8IXL6 584 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 AMOTL1Q8IY63 956 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 CKAP2LQ8IYA6 745 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 SLFN12Q8IYM2 578 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 FAM13CQ8NE31 585 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 PIGBQ92521 554 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 EVI5LQ96CN4 794 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 TM9SF2Q99805 663 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 YIPF2Q9BWQ6 316 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 MAF1Q9H063 256 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 CNNM2Q9H8M5 875 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 RRAGDQ9NQL2 400 aaPredicted RBP6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 TMOD3Q9NYL9 352 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 DAGLAQ9Y4D2 1042 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 MYBBP1AQ9BQG0 1328 aaKnown RBP6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 RREB1Q92766 1687 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 SBF2Q86WG5 1849 aa6.39□□□□□ -1.39
TBC1D1-217ENST00000511238 KLF4O43474 513 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 CST3P01034 146 aaPredicted RBP6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 SETSIPP0DME0 302 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 ACRP10323 421 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 GUCY2CP25092 1073 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 MAP4P27816 1152 aaKnown RBP6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 PRKAR2BP31323 418 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 YARSP54577 528 aaKnown RBP6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 CASP7P55210 303 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 MTHFSDQ2M296 383 aaKnown RBP6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 TBC1D10BQ4KMP7 808 aaPredicted RBP6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 TNNI3KQ59H18 835 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 ARSHQ5FYA8 562 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 SOGA3Q5TF21 947 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 PRAMEF13Q5VWM6 474 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 INTS3Q68E01 1043 aaKnown RBP6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 TAB3Q8N5C8 712 aaPredicted RBP6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 HNRNPLLQ8WVV9 542 aaKnown RBP6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 SMARCC1Q92922 1105 aaPredicted RBP6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 DPH2Q9BQC3 489 aaPredicted RBP6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 FOXQ1Q9C009 403 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 RANBP17Q9H2T7 1088 aaKnown RBP6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 STK32BQ9NY57 414 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 DONSONQ9NYP3 566 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 PALLDQ8WX93 1383 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 KDM6AO15550 1401 aaPredicted RBP6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 DOT1LQ8TEK3 1739 aa6.38□□□□□ -1.39
TBC1D1-217ENST00000511238 SRCAPQ6ZRS2 3230 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 NUP188Q5SRE5 1749 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 KLHL33A6NCF5 533 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 TNFRSF10CO14798 259 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 PPP1R12AO14974 1030 aaPredicted RBP6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 DYNC1LI2O43237 492 aaPredicted RBP6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 LRIG2O94898 1065 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 HMGB2P26583 209 aaKnown RBP6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 GATA4P43694 442 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 TDO2P48775 406 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 HMGN5P82970 282 aaKnown RBP6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 MAP7Q14244 749 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 SLC15A2Q16348 729 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 KLHL10Q6JEL2 608 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 SEZ6L2Q6UXD5 910 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 C19orf47Q8N9M1 422 aaKnown RBP6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 ERCC4Q92889 916 aaPredicted RBP6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 PHACTR3Q96KR7 559 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 PSMG3-AS1Q96PY0 264 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 LNPKQ9C0E8 428 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 IRF2BPLQ9H1B7 796 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 TNKS2Q9H2K2 1166 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 PRKRIP1Q9H875 184 aaPredicted RBP6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 LGR6Q9HBX8 967 aa6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 CCNL1Q9UK58 526 aaPredicted RBP6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 TPX2Q9ULW0 747 aaKnown RBP6.37□□□□□ -1.39
TBC1D1-217ENST00000511238 BTAF1O14981 1849 aa6.36□□□□□ -1.39
TBC1D1-217ENST00000511238 MAP3K5Q99683 1374 aa6.36□□□□□ -1.39
TBC1D1-217ENST00000511238 FAM95CA0A1B0GW59 222 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms