RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 TCP11X2Q5H9J9 407 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 PGAP2Q9UHJ9 254 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 MED24O75448 989 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 ASNSP08243 561 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 COPB1P53618 953 aaKnown RBP16.65■□□□□ 0.26
PHF3-209ENST00000509330 KCNB1Q14721 858 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 ANKRD40Q6AI12 368 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 IRF2BP1Q8IU81 584 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 GPIHBP1Q8IV16 184 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 CSGALNACT2Q8N6G5 542 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 CCDC47Q96A33 483 aaKnown RBP16.65■□□□□ 0.26
PHF3-209ENST00000509330 PPP1R13BQ96KQ4 1090 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 TEPSINQ96N21 525 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 C7orf25Q9BPX7 421 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 TANGO6Q9C0B7 1094 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 PRKCSHP14314 528 aaPredicted RBP16.65■□□□□ 0.26
PHF3-209ENST00000509330 GCFC2P16383 781 aaKnown RBP16.65■□□□□ 0.26
PHF3-209ENST00000509330 CASP14P31944 242 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 BTNL9Q6UXG8 535 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 MTMR14Q8NCE2 650 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 ZKSCAN4Q969J2 545 aaPredicted RBP16.65■□□□□ 0.26
PHF3-209ENST00000509330 BAG1Q99933 345 aaPredicted RBP16.65■□□□□ 0.26
PHF3-209ENST00000509330 CUEDC2Q9H467 287 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 PSMC6P62333 389 aa16.64■□□□□ 0.25
PHF3-209ENST00000509330 UBXN1Q04323 297 aa16.64■□□□□ 0.25
PHF3-209ENST00000509330 AP3B2Q13367 1082 aa16.64■□□□□ 0.25
PHF3-209ENST00000509330 ORC2Q13416 577 aaPredicted RBP16.64■□□□□ 0.25
PHF3-209ENST00000509330 PDIA5Q14554 519 aa16.64■□□□□ 0.25
PHF3-209ENST00000509330 KIF4BQ2VIQ3 1234 aa16.64■□□□□ 0.25
PHF3-209ENST00000509330 ARID3AQ99856 593 aa16.64■□□□□ 0.25
PHF3-209ENST00000509330 KCNMB3Q9NPA1 279 aa16.64■□□□□ 0.25
PHF3-209ENST00000509330 PSME4Q14997 1843 aa16.64■□□□□ 0.25
PHF3-209ENST00000509330 PHF20L1A8MW92 1017 aa16.64■□□□□ 0.25
PHF3-209ENST00000509330 MTMR2Q13614 643 aa16.64■□□□□ 0.25
PHF3-209ENST00000509330 ANGEL2Q5VTE6 544 aaKnown RBP16.64■□□□□ 0.25
PHF3-209ENST00000509330 PPFIBP1Q86W92 1011 aa16.64■□□□□ 0.25
PHF3-209ENST00000509330 FGFBP2Q9BYJ0 223 aa16.64■□□□□ 0.25
PHF3-209ENST00000509330 MSH4O15457 936 aa16.63■□□□□ 0.25
PHF3-209ENST00000509330 USP11P51784 963 aa16.63■□□□□ 0.25
PHF3-209ENST00000509330 TBX2Q13207 712 aaPredicted RBP16.63■□□□□ 0.25
PHF3-209ENST00000509330 TOGARAM2Q6ZUX3 1019 aa16.63■□□□□ 0.25
PHF3-209ENST00000509330 TRMT1LQ7Z2T5 733 aaKnown RBP16.63■□□□□ 0.25
PHF3-209ENST00000509330 LDHDQ86WU2 507 aa16.63■□□□□ 0.25
PHF3-209ENST00000509330 LENG9Q96B70 501 aa16.63■□□□□ 0.25
PHF3-209ENST00000509330 GLT8D2Q9H1C3 349 aa16.63■□□□□ 0.25
PHF3-209ENST00000509330 VPS33BQ9H267 617 aa16.63■□□□□ 0.25
PHF3-209ENST00000509330 COL2A1P02458 1487 aaPredicted RBP16.63■□□□□ 0.25
PHF3-209ENST00000509330 SOWAHDA6NJG2 315 aa16.63■□□□□ 0.25
PHF3-209ENST00000509330 RNF225M0QZC1 329 aaPredicted RBP16.63■□□□□ 0.25
PHF3-209ENST00000509330 FXR1P51114 621 aaKnown RBP eCLIP16.63■□□□□ 0.25
PHF3-209ENST00000509330 PABPC4Q13310 644 aaKnown RBP eCLIP16.63■□□□□ 0.25
PHF3-209ENST00000509330 FKBP1CQ5VVH2 108 aa16.63■□□□□ 0.25
PHF3-209ENST00000509330 TRPM4Q8TD43 1214 aa16.63■□□□□ 0.25
PHF3-209ENST00000509330 CHURC1Q8WUH1 139 aa16.63■□□□□ 0.25
PHF3-209ENST00000509330 RGL1Q9NZL6 768 aa16.63■□□□□ 0.25
PHF3-209ENST00000509330 DDX39AO00148 427 aaKnown RBP16.62■□□□□ 0.25
PHF3-209ENST00000509330 SREBF1P36956 1147 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 TMEM119Q4V9L6 283 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 TTI2Q6NXR4 508 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 ARHGAP27Q6ZUM4 889 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 TMEM139Q8IV31 216 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 ANKRD20A12PQ8NF67 263 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 ETNPPLQ8TBG4 499 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 P2RX5Q93086 422 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 CTAGE1Q96RT6 745 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 DUSP9Q99956 384 aaKnown RBP16.62■□□□□ 0.25
PHF3-209ENST00000509330 RAVER2Q9HCJ3 691 aaKnown RBP16.62■□□□□ 0.25
PHF3-209ENST00000509330 STK17AQ9UEE5 414 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 CCPG1Q9ULG6 757 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 ARFGEF1Q9Y6D6 1849 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 B4DLN1 442 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 GCOM1H8Y6P7 765 aaPredicted RBP16.62■□□□□ 0.25
PHF3-209ENST00000509330 TBC1D12O60347 775 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 KRT18P05783 430 aaKnown RBP16.62■□□□□ 0.25
PHF3-209ENST00000509330 POLR2MP0CAP2 368 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 NELFCDQ8IXH7 590 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 HOOK2Q96ED9 719 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 BCAS3Q9H6U6 928 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 MAGEF1Q9HAY2 307 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 AKR1B15C9JRZ8 316 aaPredicted RBP16.62■□□□□ 0.25
PHF3-209ENST00000509330 NFIBO00712 420 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 FLOT1O75955 427 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 PLA2G4BP0C869 781 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 ALAS1P13196 640 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 PTGER2P43116 358 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 KLK7P49862 253 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 TNFAIP1Q13829 316 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 CNNM4Q6P4Q7 775 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 GPBP1Q86WP2 473 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 CATSPER3Q86XQ3 398 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 WDR18Q9BV38 432 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 SEMA6BQ9H3T3 888 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 MAGEC2Q9UBF1 373 aaPredicted RBP16.62■□□□□ 0.25
PHF3-209ENST00000509330 ABCB11O95342 1321 aa16.62■□□□□ 0.25
PHF3-209ENST00000509330 H7C1D1 291 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 GYPCP04921 128 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 MYL1P05976 194 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 SPP2Q13103 211 aa16.61■□□□□ 0.25
PHF3-209ENST00000509330 CT47A1Q5JQC4 288 aaPredicted RBP16.61■□□□□ 0.25
PHF3-209ENST00000509330 SYT10Q6XYQ8 523 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms