RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 CXCL10P02778 98 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 HSPD1P10809 573 aaKnown RBP18.74■□□□□ 0.59
CXCL1-202ENST00000509101 CKBP12277 381 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 RBL2Q08999 1139 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 CDC37Q16543 378 aaPredicted RBP18.74■□□□□ 0.59
CXCL1-202ENST00000509101 MCMDC2Q4G0Z9 681 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 GPATCH4Q5T3I0 446 aaKnown RBP18.74■□□□□ 0.59
CXCL1-202ENST00000509101 ZNF589Q86UQ0 364 aaPredicted RBP18.74■□□□□ 0.59
CXCL1-202ENST00000509101 TBC1D5Q92609 795 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 TAAR1Q96RJ0 339 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 ZKSCAN3Q9BRR0 538 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 ALG1Q9BT22 464 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 UBA5Q9GZZ9 404 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 C11orf16Q9NQ32 467 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 COL20A1Q9P218 1284 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 HDAC6Q9UBN7 1215 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 GTF2IRD1Q9UHL9 959 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 ABCB11O95342 1321 aa18.74■□□□□ 0.59
CXCL1-202ENST00000509101 GJB5O95377 273 aa18.73■□□□□ 0.59
CXCL1-202ENST00000509101 CASTP20810 708 aaKnown RBP18.73■□□□□ 0.59
CXCL1-202ENST00000509101 FAM117BQ6P1L5 589 aa18.73■□□□□ 0.59
CXCL1-202ENST00000509101 MFSD6Q6ZSS7 791 aa18.73■□□□□ 0.59
CXCL1-202ENST00000509101 RGS22Q8NE09 1264 aa18.73■□□□□ 0.59
CXCL1-202ENST00000509101 SYTL5Q8TDW5 730 aaPredicted RBP18.73■□□□□ 0.59
CXCL1-202ENST00000509101 TTC14Q96N46 770 aa18.73■□□□□ 0.59
CXCL1-202ENST00000509101 TGS1Q96RS0 853 aaKnown RBP18.73■□□□□ 0.59
CXCL1-202ENST00000509101 LMCD1Q9NZU5 365 aa18.73■□□□□ 0.59
CXCL1-202ENST00000509101 ZBTB47Q9UFB7 747 aaPredicted RBP18.73■□□□□ 0.59
CXCL1-202ENST00000509101 NEDD4P46934 1319 aa18.73■□□□□ 0.59
CXCL1-202ENST00000509101 LINC01553A4QN01 128 aa18.72■□□□□ 0.59
CXCL1-202ENST00000509101 PARNO95453 639 aaKnown RBP18.72■□□□□ 0.59
CXCL1-202ENST00000509101 ZNF286BP0CG31 522 aa18.72■□□□□ 0.59
CXCL1-202ENST00000509101 PSEN2P49810 448 aa18.72■□□□□ 0.59
CXCL1-202ENST00000509101 NMIQ13287 307 aaPredicted RBP18.72■□□□□ 0.59
CXCL1-202ENST00000509101 STXBP2Q15833 593 aa18.72■□□□□ 0.59
CXCL1-202ENST00000509101 DGKDQ16760 1214 aa18.72■□□□□ 0.59
CXCL1-202ENST00000509101 C7orf31Q8N865 590 aa18.72■□□□□ 0.59
CXCL1-202ENST00000509101 NSUN6Q8TEA1 469 aaKnown RBP18.72■□□□□ 0.59
CXCL1-202ENST00000509101 CRBNQ96SW2 442 aa18.72■□□□□ 0.59
CXCL1-202ENST00000509101 RAD9AQ99638 391 aa18.72■□□□□ 0.59
CXCL1-202ENST00000509101 UBE2ZQ9H832 354 aaPredicted RBP18.72■□□□□ 0.59
CXCL1-202ENST00000509101 SUGCTQ9HAC7 445 aa18.72■□□□□ 0.59
CXCL1-202ENST00000509101 CD320Q9NPF0 282 aa18.72■□□□□ 0.59
CXCL1-202ENST00000509101 ARIH1Q9Y4X5 557 aaPredicted RBP18.72■□□□□ 0.59
CXCL1-202ENST00000509101 MUC6Q6W4X9 2439 aa18.72■□□□□ 0.59
CXCL1-202ENST00000509101 CCDC171Q6TFL3 1326 aa18.72■□□□□ 0.59
CXCL1-202ENST00000509101 ABHD14A-ACY1A0A1B0GW23 586 aa18.71■□□□□ 0.59
CXCL1-202ENST00000509101 EIF2AK2P19525 551 aaKnown RBP18.71■□□□□ 0.59
CXCL1-202ENST00000509101 PDE1AP54750 535 aa18.71■□□□□ 0.59
CXCL1-202ENST00000509101 ERVK-21P61565 698 aa18.71■□□□□ 0.59
CXCL1-202ENST00000509101 MFSD10Q14728 455 aa18.71■□□□□ 0.59
CXCL1-202ENST00000509101 ANKRD45Q5TZF3 282 aa18.71■□□□□ 0.59
CXCL1-202ENST00000509101 WNT8BQ93098 351 aa18.71■□□□□ 0.59
CXCL1-202ENST00000509101 RMDN3Q96TC7 470 aa18.71■□□□□ 0.59
CXCL1-202ENST00000509101 KATNAL1Q9BW62 490 aa18.71■□□□□ 0.59
CXCL1-202ENST00000509101 GPR37L1O60883 481 aa18.7■□□□□ 0.58
CXCL1-202ENST00000509101 F2P00734 622 aa18.7■□□□□ 0.58
CXCL1-202ENST00000509101 PCP11498 1178 aaKnown RBP18.7■□□□□ 0.58
CXCL1-202ENST00000509101 PTK7Q13308 1070 aa18.7■□□□□ 0.58
CXCL1-202ENST00000509101 IKBKEQ14164 716 aa18.7■□□□□ 0.58
CXCL1-202ENST00000509101 KIAA0753Q2KHM9 967 aa18.7■□□□□ 0.58
CXCL1-202ENST00000509101 ZNF618Q5T7W0 954 aa18.7■□□□□ 0.58
CXCL1-202ENST00000509101 ADGRF4Q8IZF3 695 aa18.7■□□□□ 0.58
CXCL1-202ENST00000509101 PNMA1Q8ND90 353 aa18.7■□□□□ 0.58
CXCL1-202ENST00000509101 ESR2Q92731 530 aa18.7■□□□□ 0.58
CXCL1-202ENST00000509101 IWS1Q96ST2 819 aa18.7■□□□□ 0.58
CXCL1-202ENST00000509101 RNF41Q9H4P4 317 aaPredicted RBP18.7■□□□□ 0.58
CXCL1-202ENST00000509101 DDX41Q9UJV9 622 aaKnown RBP18.7■□□□□ 0.58
CXCL1-202ENST00000509101 MRVI1Q9Y6F6 885 aa18.7■□□□□ 0.58
CXCL1-202ENST00000509101 ATG2AQ2TAZ0 1938 aa18.7■□□□□ 0.58
CXCL1-202ENST00000509101 EFCAB14O75071 495 aa18.69■□□□□ 0.58
CXCL1-202ENST00000509101 MBTPS1Q14703 1052 aa18.69■□□□□ 0.58
CXCL1-202ENST00000509101 TRIM71Q2Q1W2 868 aaKnown RBP18.69■□□□□ 0.58
CXCL1-202ENST00000509101 QRICH1Q2TAL8 776 aa18.69■□□□□ 0.58
CXCL1-202ENST00000509101 ARHGEF16Q5VV41 709 aa18.69■□□□□ 0.58
CXCL1-202ENST00000509101 TRAF7Q6Q0C0 670 aa18.69■□□□□ 0.58
CXCL1-202ENST00000509101 EMID1Q96A84 441 aaPredicted RBP18.69■□□□□ 0.58
CXCL1-202ENST00000509101 RALGAPA2Q2PPJ7 1873 aa18.69■□□□□ 0.58
CXCL1-202ENST00000509101 DOCK5Q9H7D0 1870 aa18.69■□□□□ 0.58
CXCL1-202ENST00000509101 DHX16O60231 1041 aaKnown RBP18.68■□□□□ 0.58
CXCL1-202ENST00000509101 SORBS3O60504 671 aa18.68■□□□□ 0.58
CXCL1-202ENST00000509101 KCNA5P22460 613 aa18.68■□□□□ 0.58
CXCL1-202ENST00000509101 ZNF200P98182 395 aaPredicted RBP18.68■□□□□ 0.58
CXCL1-202ENST00000509101 MCF2L2Q86YR7 1114 aa18.68■□□□□ 0.58
CXCL1-202ENST00000509101 FBXO22Q8NEZ5 403 aa18.68■□□□□ 0.58
CXCL1-202ENST00000509101 PPTC7Q8NI37 304 aa18.68■□□□□ 0.58
CXCL1-202ENST00000509101 C17orf80Q9BSJ5 609 aa18.68■□□□□ 0.58
CXCL1-202ENST00000509101 MAF1Q9H063 256 aa18.68■□□□□ 0.58
CXCL1-202ENST00000509101 KAT14Q9H8E8 782 aa18.68■□□□□ 0.58
CXCL1-202ENST00000509101 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.67■□□□□ 0.58
CXCL1-202ENST00000509101 PI4K2BG5E9Z4 385 aa18.67■□□□□ 0.58
CXCL1-202ENST00000509101 HAS3O00219 553 aa18.67■□□□□ 0.58
CXCL1-202ENST00000509101 LGR5O75473 907 aa18.67■□□□□ 0.58
CXCL1-202ENST00000509101 CFBP00751 764 aa18.67■□□□□ 0.58
CXCL1-202ENST00000509101 LEXMQ3ZCV2 418 aa18.67■□□□□ 0.58
CXCL1-202ENST00000509101 ASPRV1Q53RT3 343 aa18.67■□□□□ 0.58
CXCL1-202ENST00000509101 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.67■□□□□ 0.58
CXCL1-202ENST00000509101 FBXO11Q86XK2 927 aa18.67■□□□□ 0.58
CXCL1-202ENST00000509101 DGKHQ86XP1 1220 aa18.67■□□□□ 0.58
CXCL1-202ENST00000509101 DHX37Q8IY37 1157 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms