RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 GDAQ9Y2T3 454 aa10.33□□□□□ -0.76
HTT-205ENST00000509043 PITPNM2Q9BZ72 1349 aa10.33□□□□□ -0.76
HTT-205ENST00000509043 COL4A5P29400 1685 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 LGALS16A8MUM7 142 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 USP17L15C9J2P7 530 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 USP17L13C9JLJ4 530 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 USP17L11C9JVI0 530 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 USP17L18D6R9N7 530 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 USP17L22D6RA61 530 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 USP17L17D6RBQ6 530 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 USP17L19D6RCP7 530 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 USP17L20D6RJB6 530 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 GCOM1H8Y6P7 765 aaPredicted RBP10.32□□□□□ -0.76
HTT-205ENST00000509043 WNT10BO00744 389 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 CTIFO43310 598 aaKnown RBP10.32□□□□□ -0.76
HTT-205ENST00000509043 MFAP3LO75121 409 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 POLR2MP0CAP2 368 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 CCT6AP40227 531 aaKnown RBP10.32□□□□□ -0.76
HTT-205ENST00000509043 EHHADHQ08426 723 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 USP17L24Q0WX57 530 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 CENPPQ6IPU0 288 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 USP17L6PQ6QN14 398 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 TMTC1Q8IUR5 882 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 TMEM139Q8IV31 216 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 CCDC65Q8IXS2 484 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 CSGALNACT2Q8N6G5 542 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 ETNPPLQ8TBG4 499 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 TSG101Q99816 390 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 PDGFDQ9GZP0 370 aaPredicted RBP10.32□□□□□ -0.76
HTT-205ENST00000509043 MAF1Q9H063 256 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 FER1L6Q2WGJ9 1857 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 PHLPP2Q6ZVD8 1323 aa10.32□□□□□ -0.76
HTT-205ENST00000509043 POTEMA6NI47 508 aa10.31□□□□□ -0.76
HTT-205ENST00000509043 MYMKA6NI61 221 aa10.31□□□□□ -0.76
HTT-205ENST00000509043 WDR46O15213 610 aaKnown RBP10.31□□□□□ -0.76
HTT-205ENST00000509043 CTNND1O60716 968 aaKnown RBP10.31□□□□□ -0.76
HTT-205ENST00000509043 RPA1P27694 616 aa10.31□□□□□ -0.76
HTT-205ENST00000509043 JAG1P78504 1218 aa10.31□□□□□ -0.76
HTT-205ENST00000509043 SETQ01105 290 aaPredicted RBP10.31□□□□□ -0.76
HTT-205ENST00000509043 GHRHRQ02643 423 aa10.31□□□□□ -0.76
HTT-205ENST00000509043 MCM6Q14566 821 aa10.31□□□□□ -0.76
HTT-205ENST00000509043 RRP1BQ14684 758 aaKnown RBP10.31□□□□□ -0.76
HTT-205ENST00000509043 ARHGAP27Q6ZUM4 889 aa10.31□□□□□ -0.76
HTT-205ENST00000509043 LRRC15Q8TF66 581 aa10.31□□□□□ -0.76
HTT-205ENST00000509043 PLIN2Q99541 437 aa10.31□□□□□ -0.76
HTT-205ENST00000509043 POLR3CQ9BUI4 534 aaPredicted RBP10.31□□□□□ -0.76
HTT-205ENST00000509043 SRRTQ9BXP5 876 aaKnown RBP10.31□□□□□ -0.76
HTT-205ENST00000509043 ZBTB12Q9Y330 459 aaPredicted RBP10.31□□□□□ -0.76
HTT-205ENST00000509043 RIOK3O14730 519 aaKnown RBP10.3□□□□□ -0.76
HTT-205ENST00000509043 TEX33O43247 280 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 GNA14O95837 355 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 CCDC175P0C221 793 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 ECE1P42892 770 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 USP14P54578 494 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 ETF1P62495 437 aaKnown RBP10.3□□□□□ -0.76
HTT-205ENST00000509043 STK4Q13043 487 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 SHROOM1Q2M3G4 852 aaPredicted RBP10.3□□□□□ -0.76
HTT-205ENST00000509043 TSR1Q2NL82 804 aaKnown RBP10.3□□□□□ -0.76
HTT-205ENST00000509043 HSP90AA4PQ58FG1 418 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 FIGNQ5HY92 759 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 FAM83BQ5T0W9 1011 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 FKBP15Q5T1M5 1219 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 DCAF15Q66K64 600 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 KRT26Q7Z3Y9 468 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 MCF2L2Q86YR7 1114 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 IRF2BP1Q8IU81 584 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 MB21D1Q8N884 522 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 PRPF38AQ8NAV1 312 aaKnown RBP10.3□□□□□ -0.76
HTT-205ENST00000509043 DDX12PQ92771 950 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 NUP88Q99567 741 aaPredicted RBP10.3□□□□□ -0.76
HTT-205ENST00000509043 DUSP9Q99956 384 aaKnown RBP10.3□□□□□ -0.76
HTT-205ENST00000509043 TMEM39BQ9GZU3 492 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 KIAA1683Q9H0B3 1180 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 PPP2R2CQ9Y2T4 447 aa10.3□□□□□ -0.76
HTT-205ENST00000509043 BRCA1P38398 1863 aaKnown RBP10.3□□□□□ -0.76
HTT-205ENST00000509043 FRMD3A2A2Y4 597 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 USP27XA6NNY8 438 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 PHF20L1A8MW92 1017 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 FZD9O00144 591 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 OPLAHO14841 1288 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 ICAM1P05362 532 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 PLA2G4BP0C869 781 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 SLURP2P0DP57 97 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 ZNF76P36508 570 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 PTGER2P43116 358 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 ADKP55263 362 aaKnown RBP10.29□□□□□ -0.76
HTT-205ENST00000509043 UBXN1Q04323 297 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 RBL2Q08999 1139 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 SPIRE1Q08AE8 756 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 RASA3Q14644 834 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 USH1GQ495M9 461 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 PRR16Q569H4 304 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 ANKRD40Q6AI12 368 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 CYP26C1Q6V0L0 522 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 NIPA1Q7RTP0 329 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 CCDC84Q86UT8 332 aaPredicted RBP10.29□□□□□ -0.76
HTT-205ENST00000509043 MYOCDQ8IZQ8 938 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 KIAA0895Q8NCT3 520 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 ZNF507Q8TCN5 953 aa10.29□□□□□ -0.76
HTT-205ENST00000509043 NEK9Q8TD19 979 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms