RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 GPNMBQ14956 572 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 PTGISQ16647 500 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 SYDE2Q5VT97 1194 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 CNKSR3Q6P9H4 555 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 CLEC4DQ8WXI8 215 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 TGS1Q96RS0 853 aaKnown RBP11.09□□□□□ -0.63
NEDD9-211ENST00000508546 CTAGE1Q96RT6 745 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 RAD9AQ99638 391 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 ZBED2Q9BTP6 218 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 BAHCC1Q9P281 2608 aa11.09□□□□□ -0.63
NEDD9-211ENST00000508546 TPRP12270 2363 aaKnown RBP11.09□□□□□ -0.63
NEDD9-211ENST00000508546 ATG2AQ2TAZ0 1938 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 ABHD14A-ACY1A0A1B0GW23 586 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 B4DLN1 442 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 NMT2O60551 498 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 EFCAB14O75071 495 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 SELPP16109 830 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 MRPL12P52815 198 aaKnown RBP11.08□□□□□ -0.64
NEDD9-211ENST00000508546 RPS6P62753 249 aaKnown RBP11.08□□□□□ -0.64
NEDD9-211ENST00000508546 DEFB103AP81534 67 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 CCDC96Q2M329 555 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 TTBK2Q6IQ55 1244 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 SLC30A10Q6XR72 485 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 RNF207Q6ZRF8 634 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 LRRC8DQ7L1W4 858 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 NEK9Q8TD19 979 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 PPP1R13LQ8WUF5 828 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 COPS5Q92905 334 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 SEC62Q99442 399 aaKnown RBP11.08□□□□□ -0.64
NEDD9-211ENST00000508546 MTUS1Q9ULD2 1270 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 RALGAPA2Q2PPJ7 1873 aa11.08□□□□□ -0.64
NEDD9-211ENST00000508546 VPS13AQ96RL7 3174 aa11.07□□□□□ -0.64
NEDD9-211ENST00000508546 LINC01553A4QN01 128 aa11.07□□□□□ -0.64
NEDD9-211ENST00000508546 TXNP10599 105 aaKnown RBP11.07□□□□□ -0.64
NEDD9-211ENST00000508546 CALML3P27482 149 aa11.07□□□□□ -0.64
NEDD9-211ENST00000508546 SLC16A2P36021 539 aa11.07□□□□□ -0.64
NEDD9-211ENST00000508546 ZMYM1Q5SVZ6 1142 aa11.07□□□□□ -0.64
NEDD9-211ENST00000508546 GDF6Q6KF10 455 aaPredicted RBP11.07□□□□□ -0.64
NEDD9-211ENST00000508546 CCDC62Q6P9F0 684 aa11.07□□□□□ -0.64
NEDD9-211ENST00000508546 ASCL5Q7RTU5 278 aa11.07□□□□□ -0.64
NEDD9-211ENST00000508546 TMCO2Q7Z6W1 182 aaPredicted RBP11.07□□□□□ -0.64
NEDD9-211ENST00000508546 ADHFE1Q8IWW8 467 aa11.07□□□□□ -0.64
NEDD9-211ENST00000508546 DHX38Q92620 1227 aaKnown RBP11.07□□□□□ -0.64
NEDD9-211ENST00000508546 ANAPC4Q9UJX5 808 aa11.07□□□□□ -0.64
NEDD9-211ENST00000508546 WDR19Q8NEZ3 1342 aa11.07□□□□□ -0.64
NEDD9-211ENST00000508546 FOXP2O15409 715 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 ORC4O43929 436 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 RANBP6O60518 1105 aaKnown RBP11.06□□□□□ -0.64
NEDD9-211ENST00000508546 NBNO60934 754 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 ARIH2O95376 493 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 MMP3P08254 477 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 FGRP09769 529 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 CKBP12277 381 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 CTDSPL2Q05D32 466 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 PUS10Q3MIT2 529 aaKnown RBP11.06□□□□□ -0.64
NEDD9-211ENST00000508546 HERC4Q5GLZ8 1057 aaPredicted RBP11.06□□□□□ -0.64
NEDD9-211ENST00000508546 TSHZ3Q63HK5 1081 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 RGS22Q8NE09 1264 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 KAT2BQ92831 832 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 PRRX2Q99811 253 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 MAF1Q9H063 256 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 INCENPQ9NQS7 918 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 PRKAG3Q9UGI9 489 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 MTMR7Q9Y216 660 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 DMDP11532 3685 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 TTC41PQ6P2S7 1318 aa11.06□□□□□ -0.64
NEDD9-211ENST00000508546 MED19A0JLT2 244 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-211ENST00000508546 TOP1P11387 765 aaKnown RBP11.05□□□□□ -0.64
NEDD9-211ENST00000508546 CASTP20810 708 aaKnown RBP11.05□□□□□ -0.64
NEDD9-211ENST00000508546 VCPP55072 806 aaKnown RBP11.05□□□□□ -0.64
NEDD9-211ENST00000508546 ARHGAP1Q07960 439 aa11.05□□□□□ -0.64
NEDD9-211ENST00000508546 IKBKEQ14164 716 aa11.05□□□□□ -0.64
NEDD9-211ENST00000508546 TCTN1Q2MV58 587 aa11.05□□□□□ -0.64
NEDD9-211ENST00000508546 BMP8AQ7Z5Y6 402 aa11.05□□□□□ -0.64
NEDD9-211ENST00000508546 AFG1LQ8WV93 481 aa11.05□□□□□ -0.64
NEDD9-211ENST00000508546 MRPL38Q96DV4 380 aaKnown RBP11.05□□□□□ -0.64
NEDD9-211ENST00000508546 DCTPP1Q9H773 170 aa11.05□□□□□ -0.64
NEDD9-211ENST00000508546 TCP11L1Q9NUJ3 509 aa11.05□□□□□ -0.64
NEDD9-211ENST00000508546 GTF2IRD1Q9UHL9 959 aa11.05□□□□□ -0.64
NEDD9-211ENST00000508546 CTNNA3Q9UI47 895 aa11.05□□□□□ -0.64
NEDD9-211ENST00000508546 INSL6Q9Y581 213 aa11.05□□□□□ -0.64
NEDD9-211ENST00000508546 KAT6AQ92794 2004 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 DNAH14Q0VDD8 3507 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 TMEM221A6NGB7 291 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 M0R296 226 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 GH1P01241 217 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 PDHBP11177 359 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 ID4P47928 161 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 CHMP4BP1P59074 171 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 PTK7Q13308 1070 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 SUGP1Q8IWZ8 645 aaKnown RBP11.04□□□□□ -0.64
NEDD9-211ENST00000508546 FBXO22Q8NEZ5 403 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 PI4K2BQ8TCG2 481 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 ATOH1Q92858 354 aaPredicted RBP11.04□□□□□ -0.64
NEDD9-211ENST00000508546 PBXIP1Q96AQ6 731 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 TMEM47Q9BQJ4 181 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 FSD1Q9BTV5 496 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 GPCPD1Q9NPB8 672 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 DMXL1Q9Y485 3027 aa11.04□□□□□ -0.64
NEDD9-211ENST00000508546 FRMPD2Q68DX3 1309 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms