RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 IL31RAQ8NI17 732 aa17.91■□□□□ 0.46
MED28-204ENST00000506409 TRIM43Q96BQ3 446 aaPredicted RBP17.91■□□□□ 0.46
MED28-204ENST00000506409 PSTPIP2Q9H939 334 aa17.91■□□□□ 0.46
MED28-204ENST00000506409 TMEM39AQ9NV64 488 aa17.91■□□□□ 0.46
MED28-204ENST00000506409 POLR3EQ9NVU0 708 aa17.91■□□□□ 0.46
MED28-204ENST00000506409 MRVI1Q9Y6F6 885 aa17.91■□□□□ 0.46
MED28-204ENST00000506409 KIAA1217Q5T5P2 1943 aa17.9■□□□□ 0.46
MED28-204ENST00000506409 CCDC196A0A1B0GTZ2 297 aa17.9■□□□□ 0.46
MED28-204ENST00000506409 PIK3CDO00329 1044 aa17.9■□□□□ 0.46
MED28-204ENST00000506409 MEIS2O14770 477 aa17.9■□□□□ 0.46
MED28-204ENST00000506409 GH1P01241 217 aa17.9■□□□□ 0.46
MED28-204ENST00000506409 MYL3P08590 195 aa17.9■□□□□ 0.46
MED28-204ENST00000506409 FAAP100Q0VG06 881 aa17.9■□□□□ 0.46
MED28-204ENST00000506409 FUT2Q10981 343 aa17.9■□□□□ 0.46
MED28-204ENST00000506409 ITGA7Q13683 1181 aa17.9■□□□□ 0.46
MED28-204ENST00000506409 RUFY3Q7L099 469 aa17.9■□□□□ 0.46
MED28-204ENST00000506409 GPKOWQ92917 476 aaPredicted RBP eCLIP17.9■□□□□ 0.46
MED28-204ENST00000506409 AGXT2Q9BYV1 514 aa17.9■□□□□ 0.46
MED28-204ENST00000506409 LTBP2Q14767 1821 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 A6NJR5 290 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 KIAA0355O15063 1070 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 RGS20O76081 388 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 CDC27P30260 824 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 FXR1P51114 621 aaKnown RBP eCLIP17.89■□□□□ 0.45
MED28-204ENST00000506409 PSMC6P62333 389 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 PURAQ00577 322 aaKnown RBP17.89■□□□□ 0.45
MED28-204ENST00000506409 FAM126BQ8IXS8 530 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 TDHQ8IZJ6 230 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 SLC43A3Q8NBI5 491 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 BADQ92934 168 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 MTG1Q9BT17 334 aaPredicted RBP17.89■□□□□ 0.45
MED28-204ENST00000506409 ZSWIM6Q9HCJ5 1215 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 FAM217BQ9NTX9 383 aaPredicted RBP17.89■□□□□ 0.45
MED28-204ENST00000506409 DDX41Q9UJV9 622 aaKnown RBP17.89■□□□□ 0.45
MED28-204ENST00000506409 CYP46A1Q9Y6A2 500 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 V9GY48 417 aaPredicted RBP17.89■□□□□ 0.45
MED28-204ENST00000506409 FRMPD4Q14CM0 1322 aa17.89■□□□□ 0.45
MED28-204ENST00000506409 TLR3O15455 904 aaKnown RBP17.88■□□□□ 0.45
MED28-204ENST00000506409 KPNA6O60684 536 aa17.88■□□□□ 0.45
MED28-204ENST00000506409 RAG1P15918 1043 aa17.88■□□□□ 0.45
MED28-204ENST00000506409 ADD1P35611 737 aaKnown RBP17.88■□□□□ 0.45
MED28-204ENST00000506409 ARHGAP1Q07960 439 aa17.88■□□□□ 0.45
MED28-204ENST00000506409 WWC2Q6AWC2 1192 aa17.88■□□□□ 0.45
MED28-204ENST00000506409 KCNV1Q6PIU1 500 aa17.88■□□□□ 0.45
MED28-204ENST00000506409 AFG1LQ8WV93 481 aa17.88■□□□□ 0.45
MED28-204ENST00000506409 ZFP91Q96JP5 570 aaPredicted RBP17.88■□□□□ 0.45
MED28-204ENST00000506409 SEZ6LQ9BYH1 1024 aa17.88■□□□□ 0.45
MED28-204ENST00000506409 GRIN2DO15399 1336 aa17.88■□□□□ 0.45
MED28-204ENST00000506409 MMP3P08254 477 aa17.87■□□□□ 0.45
MED28-204ENST00000506409 NAPAP54920 295 aa17.87■□□□□ 0.45
MED28-204ENST00000506409 UPF3BQ9BZI7 483 aaKnown RBP17.87■□□□□ 0.45
MED28-204ENST00000506409 TM6SF1Q9BZW5 370 aa17.87■□□□□ 0.45
MED28-204ENST00000506409 TBX21Q9UL17 535 aa17.87■□□□□ 0.45
MED28-204ENST00000506409 hCG_1984214I3L0E3 225 aa17.86■□□□□ 0.45
MED28-204ENST00000506409 STAM2O75886 525 aa17.86■□□□□ 0.45
MED28-204ENST00000506409 ITGB8P26012 769 aa17.86■□□□□ 0.45
MED28-204ENST00000506409 MRPS9P82933 396 aaKnown RBP17.86■□□□□ 0.45
MED28-204ENST00000506409 LAMC2Q13753 1193 aa17.86■□□□□ 0.45
MED28-204ENST00000506409 UBE2SQ16763 222 aa17.86■□□□□ 0.45
MED28-204ENST00000506409 GNPTABQ3T906 1256 aa17.86■□□□□ 0.45
MED28-204ENST00000506409 PCNX4Q63HM2 1172 aa17.86■□□□□ 0.45
MED28-204ENST00000506409 PPP1R18Q6NYC8 613 aa17.86■□□□□ 0.45
MED28-204ENST00000506409 DHX37Q8IY37 1157 aaKnown RBP17.86■□□□□ 0.45
MED28-204ENST00000506409 ZNF713Q8N859 430 aaPredicted RBP17.86■□□□□ 0.45
MED28-204ENST00000506409 EMID1Q96A84 441 aaPredicted RBP17.86■□□□□ 0.45
MED28-204ENST00000506409 NID2Q14112 1375 aa17.86■□□□□ 0.45
MED28-204ENST00000506409 SPDYE3A6NKU9 549 aa17.85■□□□□ 0.45
MED28-204ENST00000506409 CD4P01730 458 aa17.85■□□□□ 0.45
MED28-204ENST00000506409 TGFB3P10600 412 aa17.85■□□□□ 0.45
MED28-204ENST00000506409 UBA1P22314 1058 aaKnown RBP17.85■□□□□ 0.45
MED28-204ENST00000506409 EVCP57679 992 aa17.85■□□□□ 0.45
MED28-204ENST00000506409 TOB2Q14106 344 aaPredicted RBP17.85■□□□□ 0.45
MED28-204ENST00000506409 TYW1BQ6NUM6 668 aa17.85■□□□□ 0.45
MED28-204ENST00000506409 XRRA1Q6P2D8 792 aa17.85■□□□□ 0.45
MED28-204ENST00000506409 INPP4AQ96PE3 977 aaPredicted RBP17.85■□□□□ 0.45
MED28-204ENST00000506409 BARHL2Q9NY43 387 aa17.85■□□□□ 0.45
MED28-204ENST00000506409 RTEL1Q9NZ71 1219 aa17.85■□□□□ 0.45
MED28-204ENST00000506409 STXBP3O00186 592 aa17.84■□□□□ 0.45
MED28-204ENST00000506409 SORBS3O60504 671 aa17.84■□□□□ 0.45
MED28-204ENST00000506409 B4GALT4O60513 344 aa17.84■□□□□ 0.45
MED28-204ENST00000506409 EIF5BO60841 1220 aaKnown RBP17.84■□□□□ 0.45
MED28-204ENST00000506409 SLC34A2O95436 690 aa17.84■□□□□ 0.45
MED28-204ENST00000506409 GGPS1O95749 300 aa17.84■□□□□ 0.45
MED28-204ENST00000506409 TIMP1P01033 207 aa17.84■□□□□ 0.45
MED28-204ENST00000506409 PDIA3P30101 505 aaKnown RBP17.84■□□□□ 0.45
MED28-204ENST00000506409 DGKDQ16760 1214 aa17.84■□□□□ 0.45
MED28-204ENST00000506409 FAM47CQ5HY64 1035 aa17.84■□□□□ 0.45
MED28-204ENST00000506409 CELF3Q5SZQ8 465 aaKnown RBP17.84■□□□□ 0.45
MED28-204ENST00000506409 PPTC7Q8NI37 304 aa17.84■□□□□ 0.45
MED28-204ENST00000506409 TRPV6Q9H1D0 765 aa17.84■□□□□ 0.45
MED28-204ENST00000506409 ALDH8A1Q9H2A2 487 aaPredicted RBP17.84■□□□□ 0.45
MED28-204ENST00000506409 LAMA3Q16787 3333 aa17.84■□□□□ 0.45
MED28-204ENST00000506409 SCN10AQ9Y5Y9 1956 aa17.84■□□□□ 0.45
MED28-204ENST00000506409 FIBPO43427 364 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 SCG2P13521 617 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 ICAM3P32942 547 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 ADCY7P51828 1080 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 CHMP4BP1P59074 171 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 SP2Q02086 613 aa17.83■□□□□ 0.44
MED28-204ENST00000506409 PFKFB3Q16875 520 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms