RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 IPPKQ9H8X2 491 aa5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 KCNK12Q9HB15 430 aa5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 SIT1Q9Y3P8 196 aa5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 TCRBV16S1A1N1A0A5B0 115 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 OR14I1A6ND48 311 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 F8W031 263 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 ARVCFO00192 962 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 GRK2P25098 689 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 GRK3P35626 688 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 RAB3GAP1Q15042 981 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 MROH9Q5TGP6 573 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 WWC2Q6AWC2 1192 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 PAQR3Q6TCH7 311 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 CABP7Q86V35 215 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 Q8N1Y9 231 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 NINJ1Q92982 152 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 DIRC2Q96SL1 478 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 KLHL14Q9P2G3 628 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 COA3Q9Y2R0 106 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 HCFC2Q9Y5Z7 792 aa5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-204ENST00000505804 FAM47E-STBD1D6RA91 191 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 IRS4O14654 1257 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 SRGAP3O43295 1099 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 DGKIO75912 1065 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 DNAJC8O75937 253 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 CYBBP04839 570 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 COL6A2P12110 1019 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 KCNA6P17658 529 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 NAT1P18440 290 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 RPTNQ6XPR3 784 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 PRR23BQ6ZRT6 265 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 ZNF605Q86T29 641 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 RIOX2Q8IUF8 465 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 ZC3H7AQ8IWR0 971 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 NIM1KQ8IY84 436 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 SLKQ9H2G2 1235 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 DBR1Q9UK59 544 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 TNPO3Q9Y5L0 923 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 SBNO2Q9Y2G9 1366 aa5.87□□□□□ -1.47
TOPBP1-204ENST00000505804 OPA1O60313 960 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 APPP05067 770 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 PYGMP11217 842 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 DNM2P50570 870 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 RBM10P98175 930 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 ZNF460Q14592 562 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 NR1I3Q14994 352 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 MLANAQ16655 118 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 CNNM4Q6P4Q7 775 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 ABHD17CQ6PCB6 329 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 ZNF662Q6ZS27 426 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 IRF2BP1Q8IU81 584 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 NETO2Q8NC67 525 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 FBXW5Q969U6 566 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 EPB41L1Q9H4G0 881 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 NSUN3Q9H649 340 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 ZNF552Q9H707 407 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 CATSPERZQ9NTU4 200 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 FAM53CQ9NYF3 392 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 COQ6Q9Y2Z9 468 aa5.86□□□□□ -1.47
TOPBP1-204ENST00000505804 LRRC10BA6NIK2 292 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 WNT9AO14904 365 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 SGSM2O43147 1006 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 ASLP04424 464 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 CKMP06732 381 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 GNAT1P11488 350 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 YBX1P67809 324 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 ST5P78524 1137 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 PRR5P85299 388 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 MCTP1Q6DN14 999 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 OTOP3Q7RTS5 596 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 FAM177A1Q8N128 213 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 PIP4K2CQ8TBX8 421 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 PEX11GQ96HA9 241 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 DCP1AQ9NPI6 582 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 MAGEC2Q9UBF1 373 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 PLAAQ9Y263 795 aa5.85□□□□□ -1.47
TOPBP1-204ENST00000505804 CCDC66A2RUB6 948 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 HGSO14964 777 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 NKRFO15226 690 aaKnown RBP eCLIP5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 JMJD7P0C870 316 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 IGFALSP35858 605 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 MAPKAPK2P49137 400 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 SPIRE1Q08AE8 756 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 TM4SF20Q53R12 229 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 STEAP3Q658P3 488 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 ZC3H14Q6PJT7 736 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 C16orf59Q7L2K0 433 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 MILR1Q7Z6M3 343 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 LRRTM3Q86VH5 581 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 OSTM1Q86WC4 334 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 RBM12BQ8IXT5 1001 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 IGSF22Q8N9C0 903 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 MFSD3Q96ES6 412 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 BCAS3Q9H6U6 928 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 SLC6A20Q9NP91 592 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 INTS7Q9NVH2 962 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms