RNA–Protein interactions for RNA: ENST00000504937.5

TP53-209, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-209ENST00000504937 ARIH1Q9Y4X5 557 aaPredicted RBP12.13□□□□□ -0.47
TP53-209ENST00000504937 A0A1W2PQC6 194 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 USP17L10C9JJH3 530 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 ATP1A1P05023 1023 aaKnown RBP12.12□□□□□ -0.47
TP53-209ENST00000504937 SNHG28P0DPA3 235 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 TNNI2P48788 182 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 TBC1D8BQ0IIM8 1120 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 HAS1Q92839 578 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 DHTKD1Q96HY7 919 aaPredicted RBP12.12□□□□□ -0.47
TP53-209ENST00000504937 DNAJC18Q9H819 358 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 ZNF287Q9HBT7 754 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 SCN9AQ15858 1988 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 ERICH4A6NGS2 130 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 H3BQF6 201 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 TPD52L2O43399 206 aaKnown RBP12.12□□□□□ -0.47
TP53-209ENST00000504937 TRIM21P19474 475 aaKnown RBP12.12□□□□□ -0.47
TP53-209ENST00000504937 LONRF2Q1L5Z9 754 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 SMCR8Q8TEV9 937 aaPredicted RBP12.12□□□□□ -0.47
TP53-209ENST00000504937 NAPGQ99747 312 aaPredicted RBP12.12□□□□□ -0.47
TP53-209ENST00000504937 LRWD1Q9UFC0 647 aa12.12□□□□□ -0.47
TP53-209ENST00000504937 C21orf2O43822 256 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 VSNL1P62760 191 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 TRIM14Q14142 442 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 P2RX7Q99572 595 aaKnown RBP12.11□□□□□ -0.47
TP53-209ENST00000504937 NOC4LQ9BVI4 516 aaKnown RBP12.11□□□□□ -0.47
TP53-209ENST00000504937 COA1Q9GZY4 146 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 ESYT2A0FGR8 921 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 ZNF185O15231 689 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 MYL1P05976 194 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 PLCG2P16885 1265 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 MTIF2P46199 727 aaKnown RBP12.11□□□□□ -0.47
TP53-209ENST00000504937 DNM2P50570 870 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 ADCY7P51828 1080 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 SNAP25P60880 206 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
TP53-209ENST00000504937 ZNF543Q08ER8 600 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 STIM1Q13586 685 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 MEA1Q16626 185 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 BEND6Q5SZJ8 279 aaPredicted RBP12.11□□□□□ -0.47
TP53-209ENST00000504937 APOBEC3HQ6NTF7 200 aaKnown RBP12.11□□□□□ -0.47
TP53-209ENST00000504937 CDC42EP5Q6NZY7 148 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
TP53-209ENST00000504937 KANSL2Q9H9L4 492 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 NHEJ1Q9H9Q4 299 aaPredicted RBP12.11□□□□□ -0.47
TP53-209ENST00000504937 ABCB6Q9NP58 842 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 USP40Q9NVE5 1235 aa12.11□□□□□ -0.47
TP53-209ENST00000504937 MAGEC2Q9UBF1 373 aaPredicted RBP12.11□□□□□ -0.47
TP53-209ENST00000504937 PLIN4Q96Q06 1357 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 RGPD3A6NKT7 1758 aaPredicted RBP12.1□□□□□ -0.47
TP53-209ENST00000504937 RGPD4Q7Z3J3 1758 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 USP17L15C9J2P7 530 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 USP17L13C9JLJ4 530 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 USP17L11C9JVI0 530 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 USP17L18D6R9N7 530 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 USP17L22D6RA61 530 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 USP17L17D6RBQ6 530 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 USP17L19D6RCP7 530 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 USP17L20D6RJB6 530 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 MPHOSPH10O00566 681 aaKnown RBP12.1□□□□□ -0.47
TP53-209ENST00000504937 IDEP14735 1019 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 OAS2P29728 719 aaKnown RBP12.1□□□□□ -0.47
TP53-209ENST00000504937 APBA1Q02410 837 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 USP17L24Q0WX57 530 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 TCP10Q12799 353 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 AOC3Q16853 763 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 CCDC122Q5T0U0 273 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 CENPPQ6IPU0 288 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 USP17L6PQ6QN14 398 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 ZSCAN29Q8IWY8 852 aaPredicted RBP12.1□□□□□ -0.47
TP53-209ENST00000504937 SNX29Q8TEQ0 813 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 C7orf43Q8WVR3 580 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 MMS19Q96T76 1030 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 HINFPQ9BQA5 517 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 CUEDC2Q9H467 287 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 ARFGAP3Q9NP61 516 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 FAM207AQ9NSI2 230 aaPredicted RBP12.1□□□□□ -0.47
TP53-209ENST00000504937 SERPINB13Q9UIV8 391 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 MYO6Q9UM54 1294 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 SUGT1Q9Y2Z0 365 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 ARFGEF1Q9Y6D6 1849 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 MYH4Q9Y623 1939 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 SMCHD1A6NHR9 2005 aa12.1□□□□□ -0.47
TP53-209ENST00000504937 NPHP3-ACAD11A0A0J9YXS1 232 aa12.09□□□□□ -0.47
TP53-209ENST00000504937 N4BP1O75113 896 aaKnown RBP12.09□□□□□ -0.47
TP53-209ENST00000504937 SMARCA1P28370 1054 aa12.09□□□□□ -0.47
TP53-209ENST00000504937 CLK2P49760 499 aaKnown RBP12.09□□□□□ -0.47
TP53-209ENST00000504937 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
TP53-209ENST00000504937 SMC1AQ14683 1233 aaKnown RBP12.09□□□□□ -0.47
TP53-209ENST00000504937 SV2BQ7L1I2 683 aa12.09□□□□□ -0.47
TP53-209ENST00000504937 TRAPPC11Q7Z392 1133 aa12.09□□□□□ -0.47
TP53-209ENST00000504937 TMC4Q7Z404 712 aa12.09□□□□□ -0.47
TP53-209ENST00000504937 TBC1D22AQ8WUA7 517 aa12.09□□□□□ -0.47
TP53-209ENST00000504937 DDX12PQ92771 950 aa12.09□□□□□ -0.47
TP53-209ENST00000504937 CAPZA3Q96KX2 299 aa12.09□□□□□ -0.47
TP53-209ENST00000504937 PCMTD1Q96MG8 357 aaPredicted RBP12.09□□□□□ -0.47
TP53-209ENST00000504937 TBC1D7Q9P0N9 293 aa12.09□□□□□ -0.47
TP53-209ENST00000504937 MYH10P35580 1976 aa12.09□□□□□ -0.47
TP53-209ENST00000504937 MACROD2A1Z1Q3 448 aa12.09□□□□□ -0.47
TP53-209ENST00000504937 ANKRD62A6NC57 917 aa12.09□□□□□ -0.47
TP53-209ENST00000504937 G3V3G9 751 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms