RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 NUP58Q9BVL2 599 aa10.96□□□□□ -0.65
COL1A1-210ENST00000504289 PDGFDQ9GZP0 370 aaPredicted RBP10.96□□□□□ -0.65
COL1A1-210ENST00000504289 BRCA1P38398 1863 aaKnown RBP10.95□□□□□ -0.66
COL1A1-210ENST00000504289 CLRN2A0PK11 232 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 LGALS16A8MUM7 142 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 USP17L15C9J2P7 530 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 USP17L13C9JLJ4 530 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 USP17L11C9JVI0 530 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 USP17L18D6R9N7 530 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 USP17L22D6RA61 530 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 USP17L17D6RBQ6 530 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 USP17L19D6RCP7 530 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 USP17L20D6RJB6 530 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 DNM2P50570 870 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 STX17P56962 302 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 JAG1P78504 1218 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 USP17L24Q0WX57 530 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 USP17L6PQ6QN14 398 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 ARHGAP27Q6ZUM4 889 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 TMEM139Q8IV31 216 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 SMYD4Q8IYR2 804 aaPredicted RBP10.95□□□□□ -0.66
COL1A1-210ENST00000504289 ETNPPLQ8TBG4 499 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 PPP1R13BQ96KQ4 1090 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 TRIM47Q96LD4 638 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 GDAQ9Y2T3 454 aa10.95□□□□□ -0.66
COL1A1-210ENST00000504289 MYMKA6NI61 221 aa10.94□□□□□ -0.66
COL1A1-210ENST00000504289 GCOM1H8Y6P7 765 aaPredicted RBP10.94□□□□□ -0.66
COL1A1-210ENST00000504289 WDR46O15213 610 aaKnown RBP10.94□□□□□ -0.66
COL1A1-210ENST00000504289 CTIFO43310 598 aaKnown RBP10.94□□□□□ -0.66
COL1A1-210ENST00000504289 RAD21O60216 631 aa10.94□□□□□ -0.66
COL1A1-210ENST00000504289 CTNND1O60716 968 aaKnown RBP10.94□□□□□ -0.66
COL1A1-210ENST00000504289 POLR2MP0CAP2 368 aa10.94□□□□□ -0.66
COL1A1-210ENST00000504289 RPA1P27694 616 aa10.94□□□□□ -0.66
COL1A1-210ENST00000504289 CCT6AP40227 531 aaKnown RBP10.94□□□□□ -0.66
COL1A1-210ENST00000504289 FIGNQ5HY92 759 aa10.94□□□□□ -0.66
COL1A1-210ENST00000504289 IRF2BP1Q8IU81 584 aa10.94□□□□□ -0.66
COL1A1-210ENST00000504289 TMTC1Q8IUR5 882 aa10.94□□□□□ -0.66
COL1A1-210ENST00000504289 CCDC65Q8IXS2 484 aa10.94□□□□□ -0.66
COL1A1-210ENST00000504289 CSGALNACT2Q8N6G5 542 aa10.94□□□□□ -0.66
COL1A1-210ENST00000504289 LRRC15Q8TF66 581 aa10.94□□□□□ -0.66
COL1A1-210ENST00000504289 C16orf45Q96MC5 204 aaPredicted RBP10.94□□□□□ -0.66
COL1A1-210ENST00000504289 POLR3CQ9BUI4 534 aaPredicted RBP10.94□□□□□ -0.66
COL1A1-210ENST00000504289 KIAA1683Q9H0B3 1180 aa10.94□□□□□ -0.66
COL1A1-210ENST00000504289 VEZTQ9HBM0 779 aa10.94□□□□□ -0.66
COL1A1-210ENST00000504289 ZBTB12Q9Y330 459 aaPredicted RBP10.94□□□□□ -0.66
COL1A1-210ENST00000504289 PHLPP2Q6ZVD8 1323 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 POTEMA6NI47 508 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 PHF20L1A8MW92 1017 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 FZD9O00144 591 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 OPLAHO14841 1288 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 TEX33O43247 280 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 MFAP3LO75121 409 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 GNA14O95837 355 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 PTGER2P43116 358 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 USP14P54578 494 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 ETF1P62495 437 aaKnown RBP10.93□□□□□ -0.66
COL1A1-210ENST00000504289 SETQ01105 290 aaPredicted RBP10.93□□□□□ -0.66
COL1A1-210ENST00000504289 SPIRE1Q08AE8 756 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 STK4Q13043 487 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 MCM6Q14566 821 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 FAM83BQ5T0W9 1011 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 DCAF15Q66K64 600 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 PPP4R3CPQ6ZMV5 832 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 NIPA1Q7RTP0 329 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 KRT26Q7Z3Y9 468 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 MCF2L2Q86YR7 1114 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 PRPF38AQ8NAV1 312 aaKnown RBP10.93□□□□□ -0.66
COL1A1-210ENST00000504289 ZNF507Q8TCN5 953 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 ACER1Q8TDN7 264 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 DDX12PQ92771 950 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 LENG9Q96B70 501 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 DNAJC19Q96DA6 116 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 NUP88Q99567 741 aaPredicted RBP10.93□□□□□ -0.66
COL1A1-210ENST00000504289 TSG101Q99816 390 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 DUSP9Q99956 384 aaKnown RBP10.93□□□□□ -0.66
COL1A1-210ENST00000504289 SRRTQ9BXP5 876 aaKnown RBP10.93□□□□□ -0.66
COL1A1-210ENST00000504289 TMEM39BQ9GZU3 492 aa10.93□□□□□ -0.66
COL1A1-210ENST00000504289 FRMD3A2A2Y4 597 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 NFKBIEO00221 500 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 ICAM1P05362 532 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 CCDC175P0C221 793 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 PLA2G4BP0C869 781 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 SLURP2P0DP57 97 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 BCRP11274 1271 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 ECE1P42892 770 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 RBL2Q08999 1139 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 TUBB2AQ13885 445 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 RASA3Q14644 834 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 SHROOM1Q2M3G4 852 aaPredicted RBP10.92□□□□□ -0.66
COL1A1-210ENST00000504289 CCDC84Q86UT8 332 aaPredicted RBP10.92□□□□□ -0.66
COL1A1-210ENST00000504289 MB21D1Q8N884 522 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 CEP63Q96MT8 703 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 TEPSINQ96N21 525 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 ERGIC2Q96RQ1 377 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 PLIN2Q99541 437 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 WDR18Q9BV38 432 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 TUBB2BQ9BVA1 445 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 WDR11Q9BZH6 1224 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 EDEM3Q9BZQ6 932 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 TUFT1Q9NNX1 390 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms